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Sequence Summary for: F39B2.6

Specify a sequence using a clone ID (AC7) or a coding sequence (JC8.10a)

Identified as 40S ribosomal protein S26

[Identification] [DNA sequence] [Map position] [Similarities]

Description External Links
Species: Caenorhabditis elegans
Sequence type: predicted coding sequence
Corresponding gene: rps-26 (WBGene00004495)
Corresponding protein: WP:CE16012
Origin: Wellcome Trust Sanger Institute, Cambridge UK
Sequence method: curated
Source clone: F39B2
Genomic Location: I:14,759,925..14,760,535
Interpolated Genetic Position: I:26.766
Transcripts in this region: F39B2.6.2
F39B2.6.1
Microarray assays in this region: 192800_s_at
Aff_F39B2.6
GenPep: CAB07387
Uniprot Accession number: O45499
Intronerator: Intronerator: F39B2.6
Eugenes: ACEPRED:F39B2.6
NextDB: F39B2.6
WormPD (fee required): F39B2.6


Remarks
C. elegans RPS-26 protein; contains similarity to Interpro domain IPR000892 (Ribosomal protein S26e)


Sequence

>F39B2.6
atgacgttcaagagacgtaaccacggaagaaacaagaagaaccgcggaca
cgtcgcgttcattcgctgcaccaactgcggacgctgctgcccaaaggata
aggccatcaagaagttcgttgtcagaaacatcgttgaggctgccgccgtt
agagacatcggagatgcttctgcttacacccagtatgctcttccaaagct
ctaccacaagctccattactgcatcgcctgcgccatccacagcaaggtcg
tcagaaatcgttcccgtgaggccagaagagatcgcaacccaccaccacgt
ttcggacagcgcgccgctgctgctcgtccaggagctccaggaccacgtcc
ataa

Predicted Exon Structure

NOTE: Transcript is on (+) strand.

Relative to Itself Relative to F39B2
Exon # Start End Start End
1 1 181 4756 4936
2 439 611 5194 5366

Matching cDNAs

yk1465g11.3 yk415b8.5 yk433f1.5 yk1386g08.3 yk1693e09.3 yk786g09.3 yk84f8.5 yk410e8.3 yk1589h04.3 yk229g3.3 yk210b2.5 yk345f11.3 yk1434a03.3 yk676d5.5 yk432b5.3 yk1509c05.3 yk331b6.3 yk440c8.3 yk845g12.3 yk676d5.3 EC003527 yk624h7.5 yk438d5.5 yk790d09.3 yk455h2.3 EC031736 yk809f08.3 yk375b9.3 yk1507e09.3 yk495a3.3 yk83f12.5 yk63h5.3 yk63h5.5 yk89d11.5 EC014546 yk341f11.5 yk549e3.3 yk1415c05.3 yk455h2.5 yk1620d10.3 yk442b10.3 yk329c3.3 yk313c9.3 yk300f3.5 EC026974 yk1330c05.3 yk1639e05.3 OSTR007H6_1 yk375b9.5 yk1500g01.3 yk263b11.3 yk570h8.5 yk1204a08.3 yk504d10.3 yk263b11.5 yk800g10.3 yk89d11.3 yk576b9.3 yk512b3.5 yk1060g05.3 yk669f4.3 yk576b9.5 yk58d6.5 yk550e2.5 yk725e1.3 GH333934 yk624h7.3 yk1204h06.3 yk433f1.3 EB997530 OSTF007H6_1 yk1370c10.3 yk794a03.3 yk309g7.5 yk438d5.3 yk840h05.3 yk613d7.3 yk1617h08.3 yk1734g10.3 yk1671a05.3 yk229g3.5 yk276h10.5 yk1259g02.3 yk1637d03.3 yk1540f05.3 yk513b5.3 yk329c3.5 yk341f11.3 yk832c07.3 yk1490a07.3 yk669f4.5 yk1607a03.3 yk1112e11.3 yk513b5.5 yk1734a03.3 yk457g11.3 MM454_contig12307 yk1572d03.3 yk504d10.5 yk1650d11.3 yk1627b12.3 yk331b6.5 CK581489 yk613d7.5 yk440c8.5 yk840b03.3 yk313d7.3 yk1402f05.3 yk1108b12.3 yk409f4.3 yk1568b04.3 yk1530e09.3 yk495a3.5 yk549e3.5 yk276h10.3 yk309g7.3 yk1348g11.3 yk1313c10.3 yk58d6.3 yk1749b08.3 yk313d7.5 yk1316d11.3 yk412b5.3 yk1719g01.3 yk557b5.5 yk1086d10.3 yk313c9.5 yk300f3.3 yk410e8.5 yk1120h08.3 yk570h8.3 yk1677f04.3 yk1497e08.3 yk210b2.3 yk548e7.3 yk1671h09.3 yk1072c09.5 yk1660h05.3 yk557b5.3 EC027055 yk1582f07.3 yk432b5.5 yk799e02.3 yk550e2.3 yk107c5.5 yk457g11.5 yk1086d10.5 yk725e1.5 yk722h11.5 yk779g05.5