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[Identification] [DNA sequence] [Map position] [Similarities]
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| [010711 js] changed the 5' splice site in the second intron and added the 6th exon based on EST data - |
| C. elegans AMAN-1 protein; contains similarity to Pfam domains PF07748 (Glycosyl hydrolases family 38 C-terminal domain) , PF01074 (Glycosyl hydrolases family 38 N-terminal domain) , PF09261 (Alpha mannosidase, middle domain) contains similarity to Interpro domains IPR015341 (Glycoside hydrolase, family 38, central domain), IPR011682 (Glycosyl hydrolases 38, C-terminal), IPR000602 (Glycoside hydrolase, family 38, core) |
>F55D10.1 atgaacctccaggtcattttcctatttctcggtctacttgtcatttattc ttcccaagattgtgcatggaatacgtgccataaagtggatcaagatccga atgtcatcacggctcatttgattccgcacacccatgatgaccttggttgg ataaagacagtggatcagtatttttggggagcaaaacccgagttagttcc tgttggtgtgcaatatatttataacacagttatagatgagctacttaaga atcctgatagaaggttttcgttcgccgagaccggatttctatggaggtgg tatactagtaatagtgactttgataggcatcagttgcaaaaactagtgaa aaacggacaaatcgagataatcggtggtggttgggttcaaaatgacgaag ccacatcgcactacgtcgatatcattgatcaaatgactttgggactacaa agactggaacaaatatttggagaatgtggaaaaccagttaccgggtggca aattgatccattcggacattctcgtgaaatggctaatatttatagagaga tgggatactcttctgtatactttgcccgtatccactaccttgaaaaacaa atccgattgaaaaataaaactttagagtttatgtggaatacttcggatga catcactgacaataaacttttcacgggagcgtttttcaatgacaactacg gaccaccagagggattctgttgggattcgctgtgtggagatgacccaata atggataatttgaatatcgaagggtataatgttaaggagaaggttgacgc atttgttgatcatgttaaaaaccaggctgctcatcaatctacaaaccaag taatgttgctaatgggaagcgacttccagtacaccaatgcaaactcgtgg tatgtgaacttggataaacttatcaagtatgtcaacgctgatacttcaaa aaaagttcgagtgatatactcaactcctgcatgttacacaaaagctgttc aagcaaagacccccacactttccgttaaacacgacgactttttcccatat gcgtccggacgacattcttactggacaggctattttacaagtagaccagc tttcaaaggaatgattagacaagcaagttgtatgttgcaattagcaaaac agcttgatgtcattgccaatcttgggcctgaggatgactcggatattgaa atccttcgcgaagcatctgcgcttgtacaacaccacgatgctgttacagg tactgctaaggaaaatgtgaccagagattatgagaaacaacttgcaaaag gagtgagcgaagttgaagttgttataaacgattttatgaagaaaatgaat ccggacgggttggatccaaaattagttttgtgtccgttaatcaatgaaac catttgcaaaccaattaacggttcgtctgagttttccgtcgtcattttca actcgaatggtagatatttcaatggcactattcgtattccctacagtcaa aaaacagctgtactcagggatgcacacaaaaatgttttggaaagtcagat tgtcgagacgttccaaattgatcaactcaaagacactgacagactgccat acgaaattcacgtttttgtgagagttcctccacttggatacactaccgtc tttgtcgagaaaggaagcaaacctgaacgcgtgcattttaacaataggaa aaagttcaacaccaacgtggaaattcaaaacgaatacctcatcgcaggtt ttgattcacaaggttacttgtcttatataactgaaaaagcaactaagaaa aaaagaagcatccgccaagaattcttctattacgaaggcattgattccaa ggatgaccaaccatcgggggcctatatattcagaccaaagactcaacaac ctattgcattaacatctaaacttgctttagaagtagttccgggagcaatt ataaacgaggtacgccaaaaagtgagcccatttgtctcgcaacagattcg attgcctagaggaaaaaattatatagaatttgaatggattgttgggccaa tccctaaggaaacaaaaaatcctataactaaagagtttgtaacaaggtac actacagaagttcactctaaaaatcaatcgttcactgattccaatgggcg gcaggcaatggaaagatttttcgacggtgctacttcttttgagtactctg atactgaaccaatagccggaaactactacccaataactagttttggatat atcaaggatgaaaacgctcagtttagcgttatcactgatagagcccaagg catggtagcctctgacggagttgtggaaattatgcttcatcgtcgttgct tttatgatgatcactttggagttgaggaggcattggatgagcctggaaaa gatggtgcagggctggttgccatgggaaaacatatcgttctgtttactga tgtcaaggcatcaacttcacagcttcgtcctctcgccattgacaacttcc atcagccggtgttagcatttaacaaaaatccagaaaagtttgaatttaat agactattggagtattctgggctaaaatttgagttgccaattggaataca tctcctaaccctcgagaaatggcacaagaagagtagccttatcagatttg agaacatttatcacggtgaagaaggaaatagcattaaagaatttgatcca acacacattttcacaaacttcgatattgtgtcattcaaagagcttctact tggtgctaacagagtagtgggaaaaaataaagaatcgggatcgtcattcc gcagtttcgagaaatccaagattttaacgtttgaaattgaagtggaacgc aaaatgtcaaaattataa
NOTE: Transcript is on (+) strand.
| Relative to Itself | Relative to F55D10 | |||
|---|---|---|---|---|
| Exon # | Start | End | Start | End |
| 1 | 1 | 72 | 20820 | 20891 |
| 2 | 799 | 907 | 21618 | 21726 |
| 3 | 963 | 1044 | 21782 | 21863 |
| 4 | 1098 | 1284 | 21917 | 22103 |
| 5 | 1423 | 1521 | 22242 | 22340 |
| 6 | 1572 | 1680 | 22391 | 22499 |
| 7 | 1728 | 1894 | 22547 | 22713 |
| 8 | 2240 | 2356 | 23059 | 23175 |
| 9 | 2405 | 2709 | 23224 | 23528 |
| 10 | 2752 | 2821 | 23571 | 23640 |
| 11 | 2872 | 2972 | 23691 | 23791 |
| 12 | 3017 | 3146 | 23836 | 23965 |
| 13 | 3538 | 3723 | 24357 | 24542 |
| 14 | 3770 | 3976 | 24589 | 24795 |
| 15 | 4028 | 4152 | 24847 | 24971 |
| 16 | 4194 | 4295 | 25013 | 25114 |
| 17 | 4351 | 4516 | 25170 | 25335 |
| 18 | 4565 | 4687 | 25384 | 25506 |
| 19 | 4890 | 5135 | 25709 | 25954 |
| 20 | 5184 | 5262 | 26003 | 26081 |
| 21 | 5309 | 5394 | 26128 | 26213 |