- WBPaper00044743:wdr-23_neuron_upregulated
Differentially expressed genes at false discovery rate (FDR) of 0.05 were identified using the Cuffdiff module of the Cufflinks package.
Genes that showed increased mRNA expression in wdr-23(tm1817) comparing to in N2, and was rescued in wdr-23(tm1817);nuIs225[Pmyo-2::GFP, Psnb-1::WDR-23a].
- WBPaper00042215:wdr-23(tm1817)_upregulated
Differentially expressed genes at false discovery rate (FDR) of 0.05 were identified using the Cuffdiff module of the Cufflinks package.
Genes up-regulated in wdr-23(tm1817) mutants comparing to in N2.
- WBPaper00042215:wdr-23(tm1817)_downregulated
Differentially expressed genes at false discovery rate (FDR) of 0.05 were identified using the Cuffdiff module of the Cufflinks package.
Genes down-regulated in wdr-23(tm1817) mutants comparing to in N2.
- WBPaper00059566:wdr-23(mac32)_upregulated
DESeq2, Fold Change > 2 or < 0.5.
Transcripts that showed significantly increased expression in wdr-23(mac32) embryos from parents fed with E. coliHB101, comparing to N2 embryos parents fed with E. coli HB101.
- WBPaper00059566:wdr-23(mac32)_downregulated
DESeq2, Fold Change > 2 or < 0.5.
Transcripts that showed significantly decreased expression in wdr-23(mac32) embryos from parents fed with E. coliHB101, comparing to N2 embryos parents fed with E. coli HB101.
- WBPaper00058691:WDR-5.1_interacting_protein
Spectral count (SC) WDR-5.1 > 3 and a SC control = 0 or SC WDR-5.1 vs. SC control >= 5 for at least one replicate.
Proteins that interact with HA::WDR-5.1 according to immunoprecipitation followed with mass-spectrometry-based proteomics studies.
- WBPaper00051304:CEH-23_repressed
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were repressed by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00051304:CEH-23_activating
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were activated by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).