- WBPaper00028474:dys-1_upregulated
With selection criteria of fold change greater than 50 %, p-value lower than 0.01 and mutants gene expression mean bigger than 100.
Genes with increased expression in the two dys-1 mutant alleles cx35 and cx18 as compared to the wild-type expression level.
- WBPaper00028474:dys-1_downregulated
With selection criteria of fold change more than 50 %, p-value lower than 0.01, and wild-type gene expression mean bigger than 100.
Genes with decreased expression in the two dys-1 mutant alleles cx35 and cx18 as compared to the wild-type expression level.
- WBPaper00041606:CE_S.marcescens_regulated
Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets.
Caenorhabditis elegans Genes with expression levels changed significantly after treatment of Serratia marcescens.
- WBPaper00041606:CE_X.nematophila_regulated
Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets.
Caenorhabditis elegans Genes with expression levels changed significantly after treatment of Xenorhabdus nematophila.
- WBPaper00041606:CE_S.aureus_regulated
Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets.
Caenorhabditis elegans Genes with expression levels changed significantly after treatment of Staphylococcus aureus.
- WBPaper00041606:CE_B.thuringiensis-DB27_regulated
Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets.
Caenorhabditis elegans Genes with expression levels changed significantly after treatment of Bacillus thurigiensis DB27.
- WBPaper00026720:AmyloidBeta_oxidized
Statistical comparison of carbonyl levels of proteins, matched with anti-DNP positive spots on 2D-oxyblots from C. elegans expressing amyloid beta (142) and control C. elegans samples, were performed using both ANOVA, and Students t-tests.
Proteins that were increasingly carbonylated by human amyloid beata (1-42) (CL4176) comparing to in control worm (CL1234), according to 2D-PAGE and Mass Spec analysis.