- WBPaper00051304:CEH-23_repressed
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were repressed by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00051304:CEH-23_activating
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were activated by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00050094:mes-6(bn66)_upregulated
Fold change > 2.
Transcripts that showed significantly increased expression in the dissected gonads of mes-6(bn66) dpy-20(e1282)(IV), comparing to in the dissected gonads of dpy-20(e1282)(IV)
- WBPaper00050094:mes-6(bn66)_downregulated
Fold change > 2.
Transcripts that showed significantly decreased expression in the dissected gonads of mes-6(bn66) dpy-20(e1282)(IV), comparing to in the dissected gonads of dpy-20(e1282)(IV)
- WBPaper00065623:23
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 23 expressed in: Intestine middle.
- WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
Authors considered genes differentially expressed if they had a q-value <= 0.05 and a b-value >= 1 or <= -1.
Transcripts that showed significantly decreased expression in skn-1(RNAi);dpy-7(e88) animals comparing to dpy-7(e88) vector controls.
- WBPaper00044743:wdr-23_neuron_upregulated
Differentially expressed genes at false discovery rate (FDR) of 0.05 were identified using the Cuffdiff module of the Cufflinks package.
Genes that showed increased mRNA expression in wdr-23(tm1817) comparing to in N2, and was rescued in wdr-23(tm1817);nuIs225[Pmyo-2::GFP, Psnb-1::WDR-23a].
- WBPaper00051245:epidermis_specific
Fold change > 2.
Proteins specifically expressed in epidermis, according to tissue specific APX enzyme expression using dpy-7 promoter, followed with mass spectrometry.