- WBPaper00051311:VGLN-1-interacting
DESeq2
Transcripts that physically bind VGLN-1 protein, according to RNA sequencing on immunoprecipitation using GFP-Trap A proteins, by comparing results on Pvgln-1::vgln-1::gfp (kuIs102) (strain MH4920) with Pvgln-1::gfp (kuIs103) (strain MH4922)
- WBPaper00059203:CAR-1_interacting
Cuffdiff (p value < 0.05)
Transcripts the interact with GFP-CAR-1 according to single-end enhanced crosslinking and immunoprecipitation (seCLIP).
- WBPaper00059378:lmn-1(Y59C)_downregulated
edgeR v3.24, FDR < 0.01, fold change >= 1.5.
Transcripts that showed significantly decreased expression in ygIs2[baf-1p-GFP-lmn-1(Y59C)] comparing to in WT control ygIs1[baf-1p-GFP-lamin wt].
- WBPaper00059378:lmn-1(Y59C)_upregulated
edgeR v3.24, FDR < 0.01, fold change >= 1.5.
Transcripts that showed significantly increased expression in ygIs2[baf-1p-GFP-lmn-1(Y59C)] comparing to in WT control ygIs1[baf-1p-GFP-lamin wt].