- WBPaper00032022:X-Ray_upregulated
Gene was considered induced if the difference in expression levels was significant (p < 0.05) compared to the control. To be considered the change in expression had to be at least 2 fold compared to the control.
Genes induced at least 2 fold 2 hours after 120Gy X-ray treatment
- WBPaper00044760:somatic_specific
Authors extracted all genes with more than 25 mapped reads and computed fold changes for all gene loci between wild type and mutants. The group of genes with 4-fold up-regulation in wild type was considered to be specifically expressed in the germline, while genes with 4-fold down-regulation in wild type where assumed to be specific to somatic cell lineages.
Genes specifically expressed in somatic tissue when comparing RNAseq data of N2 to glp-4(bn2ts).