- WBPaper00060399:CoCl2_6hr_downregulated_N2
Significant differentially-expressed gene sets were identified using one or two-class SAM.
Transcripts that showed significantly decreased expression after N2 animals were exposed to 5mM CoCl2 for 6 hours.
- WBPaper00060399:CoCl2_6hr_upregulated_N2
Significant differentially-expressed gene sets were identified using one or two-class SAM.
Transcripts that showed significantly increased expression after N2 animals were exposed to 5 mM CoCl2 for 6 hours.
- WBPaper00053154:human-amyloid-beta_tau_regulated
To identify differential gene expression, analysis was performed using CuffLinks 2.2.1 with false discovery rate corrected P values (q values) of < 0.05 and log2 (fold change) > 1 or < 1.
Transcripts that showed differential expression between N2 and animals expressing human amyloid beta peptide (strain CL2355) and pro-aggregating tau (strain BR5270) or anti-aggregating tau protein (BR5271), at L4 larva stage.
- WBPaper00044857:BAR-1_downregulated
Criteria used for selection of BAR-1 responsive gene targets were (1) at least a twofold change in signal response to (del)NTBAR-1 overexpression compared with control average, (2) concurrence in directional change for at least two of the three (del)NTBAR-1 induced replicates (e.g., increase or decrease of signal), and (3) an analysis of variance p-value of <=0.05.
Genes showing a statistically-significant decrease in gene expression of 2 fold or greater in response to expre ssion of delNTBAR-1 protein.
- WBPaper00044857:BAR-1_upregulated
Criteria used for selection of BAR-1 responsive gene targets were (1) at least a twofold change in signal response to (del)NTBAR-1 overexpression compared with control average, (2) concurrence in directional change for at least two of the three (del)NTBAR-1 induced replicates (e.g., increase or decrease of signal), and (3) an analysis of variance p-value of <=0.05.
Genes showing a statistically-significant increase in gene expression of 2 fold or greater in response to expre ssion of delNTBAR-1 protein.
- WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
Significant differentially-expressed gene sets were identified using one or two-class SAM.
Transcripts that showed significantly decreased expression in pqm-1(ok485) animals after exposure to 5mM CoCl2 for 6 hours, comparing to in N2 animals with the same exposure to CoCl2.
- WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
Significant differentially-expressed gene sets were identified using one or two-class SAM.
Transcripts that showed significantly increased expression in pqm-1(ok485) animals after exposure to 5mM CoCl2 for 6hours, comparing to in N2 animals with the same exposure to CoCl2.
- WBPaper00060744:Radiation_upregulated
Differential gene expression was identified by Partek GSA algorithm.
Transcripts that showed significantly increased expression among animals grown underground surrounded by nuclear waste radiation, comparing to animals protected with plexiglass panels filled withKCl (surrogate for normal background radiation) or NaCl (lowradiation group).
- WBPaper00060744:Radiation_downregulated
Differential gene expression was identified by Partek GSA algorithm.
Transcripts that showed significantly decreased expression among animals grown underground surrounded by nuclear waste radiation, comparing to animals protected with plexiglass panels filled withKCl (surrogate for normal background radiation) or NaCl (lowradiation group).