- WBPaper00065560:E.coli-HB101_downregulated_F3
Differentially expressed genes were extracted using DESeq, version 1.10.1. Assembly: PRJNA13758.WBPS13
Transcripts downregulated in F3 generation of transgenic C. elegans expressing human alpha-syn in DA neurons fed HB101 0E. coli vs. OP50.
- WBPaper00065560:E.coli-HB101_upregulated_F3
Differentially expressed genes were extracted using DESeq, version 1.10.1. Assembly: PRJNA13758.WBPS13
Transcripts upregulated in F3 generation of transgenic C. elegans expressing human alpha-syn in DA neurons fed HB101 0E. coli vs. OP50.
- WBPaper00065560:E.coli-HB101_upregulated_P0
Differentially expressed genes were extracted using DESeq, version 1.10.1. Assembly: PRJNA13758.WBPS13
Transcripts upregulated in P0 generation of transgenic C. elegans expressing human alpha-syn in DA neurons fed HB101 0E. coli vs. OP50.
- WBPaper00065560:E.coli-HB101_downregulated_P0
Differentially expressed genes were extracted using DESeq, version 1.10.1. Assembly: PRJNA13758.WBPS13
Transcripts downregulated in P0 generation of transgenic C. elegans expressing human alpha-syn in DA neurons fed HB101 0E. coli vs. OP50.
- WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
edgeR p-value < 0.01 and fold change > 4.
Transcripts that showed significantly increased expression in animals with pan-neuronal expression of human alpha-Synuclein(A53T) (aex-3p-alpha-syn (A53T)), comparing to in N2 animals.
- WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
edgeR p-value < 0.01 and fold change > 4.
Transcripts that showed significantly increased expression in animals with pan-neuronal expression of both human amyloid beta (snb-1p-Amyloid-beta(1-42) + mtl-2p-GFP) and human alpha-Synuclein(A53T) (aex-3p-alpha-syn (A53T)), comparing to in N2 animals.
- WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_downregulated
edgeR p-value < 0.01 and fold change > 4.
Transcripts that showed significantly decreased expression in animals with pan-neuronal expression of both human amyloid beta (snb-1p-Amyloid-beta(1-42) + mtl-2p-GFP) and human alpha-Synuclein(A53T) (aex-3p-alpha-syn (A53T)), comparing to in N2 animals.
- WBPaper00065623:13
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 13 expressed in: Intestine middle.