- [cgc5976]:class_1
hierarchical clustering
The cluster contains genes that are upregulated with daf-2 RNAi treatment and in daf-2 pathway mutants, and downregulated with daf-16 RNAi treatment.
- [cgc5976]:class_2
hierarchical clustering
The cluster contains genes that are upregulated with daf-16 RNAi treatment and downregulated with daf-2 RNAi treatment and in daf-2 pathway mutants.
- WBPaper00045842:elt-2_dependent_hypoxia_upregulated
Cufflinks v2.1.1
Genes with significant upregulation following hypoxia in an ELT-2-dependent manner. RNAseq were performed on normoxia N2, hypoxia N2, normoxia elt-2(RNAi) and hypoxia elt-2(RNAi) animals.
- WBPaper00057068:numr-1(RNAi)_upregulated
DESeq2, v1.12.0, fold change > 2, FDR < 0.05
Transcripts that showed significantly increased expression in numr-1/2(RNAi) animals comparing to control RNAi animals, at late L3 larva stage.
- WBPaper00057068:numr-1(RNAi)_downregulated
DESeq2, v1.12.0, fold change > 2, FDR < 0.05
Transcripts that showed significantly decreased expression in numr-1/2(RNAi) animals comparing to control RNAi animals, at late L3 larva stage.
- WBPaper00050370:mys-1(RNAi)_L3_downregulated
DESeq v1.6.3. Fold change > 1.5.
Transcripts that showed significantly decreased expression in her-1(e1520);sdc-2(y74);mys-1(RNAi) comparing to in her-1(e1520);sdc-2(y74) RNAi control animals, during L3 stage.
- WBPaper00050370:mys-1(RNAi)_L3_upregulated
DESeq v1.6.3. Fold change > 1.5.
Transcripts that showed significantly increased expression in her-1(e1520);sdc-2(y74);mys-1(RNAi) comparing to in her-1(e1520);sdc-2(y74) RNAi control animals, during L3 stage.