- WBPaper00048690:gonad-male-biased
Cuffdiff v2.1.1
Genes that are enriched in male gonad according to RNAseq analysis towards FACS sorted Z1, Z4 and their daughter cells collected from L4 males and hermaphrodites.
- WBPaper00048690:gonad-hermaphrodite-biased
Cuffdiff v2.1.1
Genes that are enriched in hermaphrodite gonad according to RNAseq analysis towards FACS sorted Z1, Z4 and their daughter cells collected from L4 males and hermaphrodites.
- WBPaper00061340:Z1_Z4
Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm.
Top 300 transcripts enriched in Z1, Z4 according to single cell RNAseq.
- WBPaper00030839:Embryo_A_Class
A two-class unpaired analysis of the data was performed to identify genes that differ by >= 1.5-fold from the reference at a FDR of <1% for the larval pan-neural, embryonic pan-neural, and larval A-class motor neuron datasets.
Embryonic A-class motor neuron enriched genes.
- WBPaper00030839:Larval_A_Class
A two-class unpaired analysis of the data was performed to identify genes that differ by >= 1.5-fold from the reference at a FDR of <1% for the larval pan-neural, embryonic pan-neural, and larval A-class motor neuron datasets.
Larval A-class motor neuron enriched genes.
- WBPaper00032454:IR_upregulated
To identify differentially expressed genes, gene expression intensity was compared using a moderated t-test and a Bayes smoothing approach developed for a low number of replicates.
Genes up-regulated following ionizing radiation (IR) treatment.