- WBPaper00065623:42
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 42 expressed in: Unassigned hypodermis/gonadal sheath cells.
- WBPaper00051304:CEH-23_repressed
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were repressed by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00051304:CEH-23_activating
Identified by 1 class SAM with FDR=0.59, 1.5 fold gene cutoff.
Transcripts that were activated by CEH-23 by comparing expression between isp-1(qm150) and ceh-23(ms23);isp-1(qm150).
- WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
Adjusted p-value (Padj) <= 0.01 was considered significant for differential gene expression.
Transcripts that showed significantly increased expression in uninfected nhr-42(tm1375) animals comparing to in uninfected N2 animals.
- WBPaper00065225:nhr-42(tm1375)_downregulated_uninfected
Adjusted p-value (Padj) <= 0.01 was considered significant for differential gene expression.
Transcripts that showed significantly decreased expression in uninfected nhr-42(tm1375) animals comparing to in uninfected N2 animals.
- WBPaper00061613:human-amyloid-beta_upregulated
edgeR p-value < 0.01 and fold change > 4.
Transcripts that showed significantly increased expression in animals with pan-neuronal expression of human amyloid beta (snb-1p-Amyloid-beta(1-42) + mtl-2p-GFP), comparing to in N2 animals.
- WBPaper00061613:human-amyloid-beta_downregulated
edgeR p-value < 0.01 and fold change > 4.
Transcripts that showed significantly decreased expression in animals with pan-neuronal expression of human amyloid beta (snb-1p-Amyloid-beta(1-42) + mtl-2p-GFP), comparing to in N2 animals.