- WBPaper00064315:mes-4(bn73)_downregulated_PGCs
DESeq2(v1.32.0), FDR < 0.05.
Transcripts that showed significantly decreased expression in mes-4(bn73) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
- WBPaper00064315:mes-4(bn73)_upregulated_PGCs
DESeq2(v1.32.0), FDR < 0.05.
Transcripts that showed significantly increased expression in mes-4(bn73) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
- WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
DESeq2(v1.32.0), FDR < 0.05.
Transcripts that showed significantly increased expression in mrg-1(qa6200) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
- WBPaper00064315:met-1(bn200)_upregulated_PGCs
DESeq2(v1.32.0), FDR < 0.05.
Transcripts that showed significantly increased expression in met-1(bn200) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
- WBPaper00064315:mes-3(bn199)_upregulated_PGCs
DESeq2(v1.32.0), FDR < 0.05.
Transcripts that showed significantly increased expression in mes-3(bn199) comparing to in control animals in primordial germ cells (PGCs) at L1 larva stage.
- WBPaper00053321:PGCs_depleted_NuGen
For differential gene expression analysis, sets of independent mutant and control mapped reads (e.g biological replicates) were used in cuffdiff analysis. The cutoff of FDR(q value)=0.05 was used as a significance cutoff for all the analyses.
Transcripts that were depleted in embryonic primordial germ cells (PGCs) comparing to in whole embryo, according to NuGen RNAseq.
- WBPaper00053321:PGCs_enriched_NuGen
For differential gene expression analysis, sets of independent mutant and control mapped reads (e.g biological replicates) were used in cuffdiff analysis. The cutoff of FDR(q value)=0.05 was used as a significance cutoff for all the analyses.
Transcripts that were enriched in embryonic primordial germ cells (PGCs) comparing to in whole embryo, according to NuGen RNAseq.