- WBPaper00027111:rde-3(r459)_upregulated
A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type.
Genes predicted to be upregulated more than 2.0 fold in rde-3(r459) mutant worms as compared to wild-type animals (t-test P-value < 0.05).
- WBPaper00027111:rde-3(r459)_downregulated
A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type.
Genes predicted to be downregulated more than 2.0 fold in rde-3(r459) mutant worms as compared to wild-type animals (t-test P-value < 0.05).
- WBPaper00027111:rde-3(ne298)_downregulated
A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type.
Genes predicted to be downregulated more than 2.0 fold in rde-3(ne298) mutant worms as compared to wild-type animals (t-test P-value < 0.05).
- WBPaper00027111:rde-3(ne298)_upregulated
A t-test (5% confidence) was applied to the triplicate sample data for each transcript in each mutant to identify genes significantly elevated or decreased compared with the wild type.
Genes predicted to be upregulated more than 2.0 fold in rde-3(ne298) mutant worms as compared to wild-type animals (t-test P-value < 0.05).
- WBPaper00045090:RDE-12_dependent
N.A.
Target genes whose small RNA levels are reduced more than 3-fold in the rde-12 mutants compared to N2 in the ERGO-1 and RDE-1 pathways. The minimal read cutoff is 20 in this analysis
- WBPaper00029437:rde-4_upregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes upregulated in rde-4(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00029437:rde-1_downregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes downregulated in rde-1(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.
- WBPaper00029437:rde-1_upregulated
Statistical t-test: P < 0.05 for rde-4(-/-) and rde-1(-/-) analyses; P < 0.01 for dcr-1(-/-) analysis with a threshold of 1.5-fold misregulation.
Genes upregulated in rde-1(-/-) adult animals by at least 1.5 fold and P < 0.05, as determined by a multisample t-test.