- WBPaper00027022:tax-6(jh107)_upregulated
The gel image was analyzed with Melanie IV software (GeneBio,Geneva, Switzerland). Variance analysis of spot volume and comparisons of mean values of samples from mutant vs. wild-type worms were performed using SAS statistical software, with a significance level of p < 0.05.
Proteins up-regulated more than twofold in tax-6(jh107) mutants.
- WBPaper00027022:tax-6(jh107)_downregulated
The gel image was analyzed with Melanie IV software (GeneBio,Geneva, Switzerland). Variance analysis of spot volume and comparisons of mean values of samples from mutant vs. wild-type worms were performed using SAS statistical software, with a significance level of p < 0.05.
Proteins down-regulated more than twofold in tax-6(jh107) mutants.
- WBPaper00033444:BacteriaDiet_regulated
Data was analyzed using SAS statistical software (SAS Institute Inc., Cary, North Carolina, USA) using a two-step mixed model analysis of variance to account for all possible sources of variance. This two-step ANOVA was performed using the MIXED procedure in SAS.
Significantly differentially expressed genes after different bacteria treatment. Transcriptional responses of wild-type C. elegans adults were assayed after growth on each of the four bacteria - E. coli, M. luteus, Pseudomonas sp., or B. megaterium. These genes were differentially expressed and statistically significant with multiple testing correction (q < 0.01) across all pair-wise comparisons.
- WBPaper00027022:cnb-1(jh103)_downregulated
The gel image was analyzed with Melanie IV software (GeneBio,Geneva, Switzerland). Variance analysis of spot volume and comparisons of mean values of samples from mutant vs. wild-type worms were performed using SAS statistical software, with a significance level of p < 0.05.
Proteins down-regulated more than twofold in cnb-1(jh103) mutants
- WBPaper00027022:cnb-1(jh103)_upregulated
The gel image was analyzed with Melanie IV software (GeneBio,Geneva, Switzerland). Variance analysis of spot volume and comparisons of mean values of samples from mutant vs. wild-type worms were performed using SAS statistical software, with a significance level of p < 0.05.
Proteins up-regulated more than twofold in cnb-1(jh103) mutants.
- WBPaper00065315:mating_upregulated_Day6-7
DESeq2 v.1.10.1, fold change > 2, FDR < 0.05.
Transcripts that showed significantly increased expression in sterile glp-1(e2144) animals after exposed to males during day 6 to day 6 adult stage.