- WBPaper00065623:68
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 68 expressed in: Uterine seam cells.
- WBPaper00065623:34
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 34 expressed in: Seam cells (grd+).
- WBPaper00050990:seam_expressed
Cufflinks FPKM value >=1.
Transcripts expressed in seam cells, according to PAT-Seq analysis using Pgrd-10-GFP-3XFLAG mRNA tagging.
- WBPaper00065623:32
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 32 expressed in: Seam cells (bus+) and excretory duct subpopulation.
- WBPaper00050990:seam_enriched
Cufflinks FPKM value >=1.
Transcripts uniquely expressed in seam cells, according to PAT-Seq analysis using Pgrd-10-GFP-3XFLAG mRNA tagging.
- WBPaper00061340:Seam_cell
Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm.
Top 300 transcripts enriched in seam cell according to single cell RNAseq.
- WBPaper00056826:SGP_biased
DESeq2, fold change >= 2, FDR <= 0.01.
Transcripts that showed significantly higher expression in somatic gonad precursor cells (SGP) vs. head mesodermal cells (hmc).