- WBPaper00065623:95
CellRanger, DecontX, Monocle3, Louvain algorithm.
Single-cell RNA-Seq cell group 95 expressed in: RIC.
- WBPaper00064727:daf-2(e1370)_upregulated
NOIseq(v2.34.0), fold change > = 1.5, Differentially expressed genes (DEGs) were defined as having a probability of differentialexpression > 95%.
Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in control animals.
- WBPaper00064727:daf-2(e1370)_downregulated
NOIseq(v2.34.0), fold change > = 1.5, Differentially expressed genes (DEGs) were defined as having a probability of differentialexpression > 95%.
Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in control animals.
- WBPaper00042234:xpa-1_upregulated
After pre-processing and normalization, the Student t-test was executed to reveal transcripts statistically significantly regulated at the 95% confidence level (P < 0.05) between xpa-1 and WT.
Genes that showed increased expression in xpa-1(ok698) comparing with N2 in mixed stages.
- WBPaper00031097:unc-95(su33)_upregulated
Genes with differences corresponding to P-value < 0.01 in either the high- or the low-photomultiplier scans (Students t-test) in all replicates were considered to be significantly regulated.
Genes that showed more than 2 fold increase of expression in unc-95(su33) comparing with N2.
- WBPaper00005432:xbp-1(zc12)_downregulated
A t-test was used to determine the probability that differences in treatment-induced levels of mRNA between the wild type and xbp-1 mutant were due to chance. A 95% confidence limit was applied.
Genes whose activation by tunicamycin treatment is attenuated in xbp-1(zc12)III mutant animals.
- WBPaper00005432:xbp-1(zc12)_upregulated
A t-test was used to determine the probability that differences in treatment-induced levels of mRNA between the wild type and xbp-1 mutant were due to chance. A 95% confidence limit was applied.
Genes whose activation by tunicamycin treatment is enhanced in xbp-1(zc12)III mutant animals.
- cgc4489_hermaphrodite_enriched_neuronal_genes
Authors first used a Student t test to select only those genes that were significantly regulated using both the observed standard deviation (local SD) and the global standard deviation compiled from a large number of different DNA microarray experiments (global SD). Authors selected genes that are sex regulated above the 95% confidence level.
hermaphrodite-enriched neuronal genes
- cgc4489_male_enriched_neuronal_genes
Authors first used a Student t test to select only those genes that were significantly regulated using both the observed standard deviation (local SD) and the global standard deviation compiled from a large number of different DNA microarray experiments (global SD). Authors selected genes that are sex regulated above the 95% confidence level.
male-enriched neuronal genes
- cgc4489_hermaphrodite_enriched_transcription_factors
Authors first used a Student t test to select only those genes that were significantly regulated using both the observed standard deviation (local SD) and the global standard deviation compiled from a large number of different DNA microarray experiments (global SD). Authors selected genes that are sex regulated above the 95% confidence level.
hermaphrodite-enriched transcription factors