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WormBase Tree Display for Variation: WBVar00143398

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Name Class

WBVar00143398EvidencePaper_evidenceWBPaper00005927
NamePublic_namee678
Sequence_detailsType_of_mutationDeletion
SeqStatusPending_curation
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000060
WBStrain00003976
WBStrain00004197
WBStrain00004377
WBStrain00004378
WBStrain00004384
WBStrain00004389
WBStrain00004401
WBStrain00004457
WBStrain00004461
WBStrain00004462
WBStrain00004463
WBStrain00004464
WBStrain00004465
WBStrain00004466
WBStrain00004489
WBStrain00004494
WBStrain00004621
WBStrain00004635
WBStrain00004769
WBStrain00004959
WBStrain00004966
WBStrain00004971
WBStrain00004972
WBStrain00004977
WBStrain00004981
WBStrain00005008
WBStrain00005025
WBStrain00005164
WBStrain00005458
WBStrain00005498
WBStrain00005513
WBStrain00005543
WBStrain00005545
WBStrain00006191
WBStrain00006192
WBStrain00006224
WBStrain00006316
WBStrain00006338
WBStrain00006650
WBStrain00006666
WBStrain00007262
WBStrain00007263
WBStrain00007265
WBStrain00007582
WBStrain00007735
WBStrain00007737
WBStrain00007738
WBStrain00007890
WBStrain00007891
WBStrain00008438
WBStrain00008454
WBStrain00008459
WBStrain00022513
WBStrain00022676
WBStrain00023588
WBStrain00023812
WBStrain00023819
WBStrain00023820
WBStrain00023899
WBStrain00023904
WBStrain00023905
WBStrain00023906
WBStrain00023921
WBStrain00023922
WBStrain00023977
WBStrain00026348
WBStrain00026372
WBStrain00026580
WBStrain00026732
WBStrain00026733
WBStrain00026734
WBStrain00026841
WBStrain00026847
WBStrain00026853
WBStrain00026868
WBStrain00026884
WBStrain00026887
WBStrain00026888
WBStrain00026896
WBStrain00027012
WBStrain00027056
WBStrain00027067
WBStrain00027209
WBStrain00028744
WBStrain00028774
WBStrain00029108
WBStrain00029287
WBStrain00030826
WBStrain00031247
WBStrain00033315
WBStrain00033917
WBStrain00034228
WBStrain00034334
WBStrain00034605
WBStrain00034929
WBStrain00034930
WBStrain00035043
WBStrain00035090
WBStrain00035094
WBStrain00035095
WBStrain00035097
WBStrain00035098
WBStrain00035100
WBStrain00035118
WBStrain00035119
WBStrain00035120
WBStrain00035121
WBStrain00035122
WBStrain00035123
WBStrain00035124
WBStrain00035125
WBStrain00035496
WBStrain00035497
WBStrain00035517
WBStrain00035570
WBStrain00035617
WBStrain00035620
WBStrain00035628
WBStrain00035647
WBStrain00035658
WBStrain00035665
WBStrain00035690
WBStrain00035768
WBStrain00035793
WBStrain00035795
WBStrain00035803
WBStrain00035804
WBStrain00035805
WBStrain00035806
WBStrain00035810
WBStrain00035833
WBStrain00035854
WBStrain00035870
WBStrain00035873
WBStrain00035889
WBStrain00035942
WBStrain00035977
WBStrain00036011
WBStrain00036029
WBStrain00036039
WBStrain00036052
WBStrain00036066
WBStrain00036075
WBStrain00036076
WBStrain00036085
WBStrain00036099
WBStrain00036113
WBStrain00036114
WBStrain00036115
WBStrain00036120
WBStrain00036124
WBStrain00036125
WBStrain00036126
WBStrain00036173
WBStrain00036205
WBStrain00036212
WBStrain00036244
WBStrain00036253
WBStrain00036278
WBStrain00036315
WBStrain00036329
WBStrain00036331
WBStrain00036338
WBStrain00036348
WBStrain00036349
WBStrain00036361
WBStrain00036371
WBStrain00036389
WBStrain00036444
WBStrain00036553
WBStrain00036595
WBStrain00036650
WBStrain00036654
WBStrain00036719
WBStrain00036722
WBStrain00036740
WBStrain00036785
WBStrain00036803
WBStrain00036806
WBStrain00036840
WBStrain00036868
WBStrain00036906
WBStrain00036952
WBStrain00037025
WBStrain00037026
WBStrain00037184
WBStrain00037230
WBStrain00037401
WBStrain00037441
WBStrain00037451
WBStrain00037452
WBStrain00037460
WBStrain00037468
WBStrain00037474
WBStrain00037481
WBStrain00037508
WBStrain00037520
WBStrain00037540
WBStrain00037560
WBStrain00037561
WBStrain00037577
WBStrain00037652
WBStrain00037676
WBStrain00037681
WBStrain00037702
WBStrain00037705
WBStrain00037731
WBStrain00037756
WBStrain00037784
WBStrain00040207
WBStrain00040208
WBStrain00040209
WBStrain00040210
WBStrain00040433
WBStrain00040614
WBStrain00047007
WBStrain00047484
WBStrain00049390
WBStrain00049441
WBStrain00054623
WBStrain00057047
WBStrain00057048
WBStrain00057049
WBStrain00057050
LaboratoryCB
LW
StatusLive
AffectsGeneWBGene00003056
InteractorWBInteraction000521785
WBInteraction000521941
WBInteraction000524031
WBInteraction000537302
GeneticsMapping_dataIn_2_point154
159
162
164
165
166
167
168
169
170
171
172
173
174
175
176
283
286
288
299
374
397
414
427
428
434
475
624
1829
3148
3150
3384
3634
3731
4456
4467
4570
6103
6110
6111
6119
6122
6135
6172
6173
6187
In_multi_point164
165
166
167
168
169
170
171
173
177
230
277
278
280
281
282
357
358
359
393
395
410
415
416
417
419
421
422
423
424
531
532
533
534
535
536
551
552
582
587
612
618
619
644
645
646
731
732
789
793
794
880
916
1194
1207
1208
1212
1213
1319
1320
1321
1322
1328
1339
1342
1346
1353
1369
1387
1540
1546
1547
1550
1551
1588
1739
2005
2087
2171
2227
2228
2229
2230
2231
2232
2233
2234
2289
2290
2291
2292
2428
2441
2442
2453
2461
3243
3272
3293
3322
3323
3378
3516
4784
4794
4795
5465
5472
In_pos_neg_data935
1859
1888
1912
1928
1944
1960
1976
1992
2019
2040
2051
2058
2174
2175
2178
2362
5453
5834
Marked_rearrangementszT1[lon-2(e678) unc-29(e403)]
szT1[lon-2(e678)]
DescriptionPhenotypeWBPhenotype:0000022Paper_evidenceWBPaper00005927
WBPaper00000031
WBPaper00029002
WBPaper00043908
WBPaper00005747
Person_evidenceWBPerson261
Curator_confirmedWBPerson48
WBPerson557
WBPerson712
WBPerson2987
Remark50% longer than wild typePaper_evidenceWBPaper00005927
Curator_confirmedWBPerson48
about 50% longer than wildtype at all stagesPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Table 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Ease_of_scoringES3_Easy_to_scorePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000050Person_evidenceWBPerson261
Curator_confirmedWBPerson712
Remarksome embryonic lethalityPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
PenetranceIncompletePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000164Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0000444Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkMale bursa slightly elongated. Mating always successful (ME3), possibly mating not successful (ME0) at 25C.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
PenetranceIncompletePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000961Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkTable 1Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
WBPhenotype:0001005Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0001183Paper_evidenceWBPaper00053362
Curator_confirmedWBPerson25685
WBPhenotype:0001412Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkAuthors report "multiple or discontinuous ala" (Table 1)Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
WBPhenotype:0001517Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
RemarkAuthors report "abnormal branched annuli (lateral hypodermis)" and "wide annuli" (Table 1)Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
Phenotype_assayGenotypekaIs12 [col-19::gfp]Paper_evidenceWBPaper00005747
Curator_confirmedWBPerson2987
WBPhenotype:0002284Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002289Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002293Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002295Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002300Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002301Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002309Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002312Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002319Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002322Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002325Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002337Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0002345Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0004022Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
WBPhenotype:0004023Paper_evidenceWBPaper00043908
Curator_confirmedWBPerson2987
Phenotype_not_observedWBPhenotype:0000505Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
RemarkMales are not Ram.Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
EQ_annotationsAnatomy_termWBbt:0006941PATO:0000460Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Life_stageWBls:0000056PATO:0000460Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Phenotype_assayTemperature20CPaper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
Genotypehim-5(e1490)Paper_evidenceWBPaper00001328
Curator_confirmedWBPerson712
WBPhenotype:0001652Paper_evidenceWBPaper00032446
Curator_confirmedWBPerson2021
WBPhenotype:0001767Paper_evidenceWBPaper00032413
Curator_confirmedWBPerson2021
RemarkNo significant defects in embryonic DA/DB motor neuron left/right projection patterns (Figure S1A).Paper_evidenceWBPaper00032413
Curator_confirmedWBPerson2021
Variation_effectNullPaper_evidenceWBPaper00032413
Curator_confirmedWBPerson2021
ReferenceWBPaper00022233
WBPaper00015421
WBPaper00015107
WBPaper00043908
WBPaper00029020
WBPaper00032446
WBPaper00001328
WBPaper00000031
WBPaper00011213
WBPaper00032413
WBPaper00005747
WBPaper00011725
WBPaper00029002
WBPaper00014349
WBPaper00015055
WBPaper00018212
WBPaper00005927
WBPaper00016363
WBPaper00016119
WBPaper00015994
WBPaper00016075
WBPaper00016027
WBPaper00016014
WBPaper00015483
WBPaper00015253
WBPaper00014080
WBPaper00014086
WBPaper00014166
WBPaper00053362
WBPaper00061175
WBPaper00062015
WBPaper00065849
WBPaper00066003
Remarke678 is a ~9 kb deletion
Variation stub/paper connection generated from the May 2021 NN VFP dataset.
Created by WBPerson51134 from the NN_VFP_triage_pipeline
MethodDeletion_allele