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WormBase Tree Display for Gene: WBGene00001864

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Name Class

WBGene00001864SMapS_parentSequenceD1086
IdentityVersion2
NameCGC_namehim-5Person_evidenceWBPerson261
Sequence_nameD1086.4
Molecular_nameD1086.4a
D1086.4a.1
CE09062
D1086.4b
CE45310
D1086.4b.1
Other_nameCELE_D1086.4Accession_evidenceNDBBX284605
Public_namehim-5
DB_infoDatabaseWormQTLgeneWBGene00001864
WormFluxgeneWBGene00001864
NDBlocus_tagCELE_D1086.4
NCBIgene183932
RefSeqproteinNM_001269627.3
NM_001269626.2
TrEMBLUniProtAccO17724
E1B6V2
UniProt_GCRPUniProtAccO17724
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
222 Aug 2008 17:09:12WBPerson2970EventAcquires_mergeWBGene00008391
Name_changeSequence_nameD1086.4
Acquires_mergeWBGene00008391
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhim
Reference_alleleWBVar00144023
Allele (43)
Legacy_informatione1467ts : at 20x self-progeny 16% XO male 11% ova are nullo-X as a result of reductional meiotic nondisjunction; X chromosome recombination specifically reduced 50%. ES3 (progeny). ME3. NA2 (e1490 (stronger allele : 33% Him at 20x)).
See also e1467, e1490
[C.elegansII] e1467ts : at 20C self-progeny 16% XO male, 3% 3X herm, 11% ova are nullo-X as a result of reductional meiotic nondisjunction; X chromosome recombination specifically reduced 50% or more, except at left end (increased); additional sterility not due to autosomal nondisjunction ( brood reduced 64% at 25C); some embryonic lethality. ES3 (progeny). ME3. OA4: e1490 (stronger allele : 33% Him at 20C)). Cloned: cosmid rescue K02A12. [Hodgkin et al. 1979; Broverman and Meneely 1994; FH]
Strain (470)
RNASeq_FPKM (74)
GO_annotation00008007
00030301
00030302
00030303
OrthologchrV_pilon.g16429Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionhim-5 was identified in screens for genes that when mutated resulted in an increased frequency of X chromosome nondisjunction and thus, an increased frequency of genotypically XO males in self-fertile populations; him-5 functions in X chromosome dynamics by regulating the number and distribution of X chromosome pairing events.Paper_evidenceWBPaper00000179
WBPaper00001852
Curator_confirmedWBPerson1843
Date_last_updated28 Oct 2010 00:00:00
Automated_descriptionInvolved in meiotic DNA double-strand break formation involved in reciprocal meiotic recombination and meiotic chromosome segregation. Located in condensed chromosome. Expressed in gonad.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSD1086.4a
D1086.4b
Corresponding_transcriptD1086.4a.1
D1086.4b.1
Associated_featureWBsf647510
WBsf232867
WBsf232868
WBsf232869
Experimental_infoRNAi_resultWBRNAi00030368Inferred_automaticallyRNAi_primary
WBRNAi00111474Inferred_automaticallyRNAi_primary
WBRNAi00012552Inferred_automaticallyRNAi_primary
WBRNAi00061770Inferred_automaticallyRNAi_primary
WBRNAi00043422Inferred_automaticallyRNAi_primary
WBRNAi00111473Inferred_automaticallyRNAi_primary
Expr_patternExpr9917
Expr1023729
Expr1031097
Expr1147415
Expr2012430
Expr2030666
Drives_constructWBCnstr00036641
WBCnstr00038151
Construct_productWBCnstr00036641
WBCnstr00038150
WBCnstr00038151
Microarray_results (18)
Expression_cluster (128)
Interaction (68)
Map_infoMapVPosition6.09216Error0.018285
Well_ordered
PositivePositive_cloneD1086Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point308
6177
Multi_point (33)
Pos_neg_data1761
4301
6866
7401
Landmark_gene
ReferenceWBPaper00000179
WBPaper00000447
WBPaper00000498
WBPaper00000536
WBPaper00000565
WBPaper00000608
WBPaper00000634
WBPaper00000655
WBPaper00000656
WBPaper00000665
WBPaper00000676
WBPaper00000739
WBPaper00000879
WBPaper00000902
WBPaper00000913
WBPaper00000983
WBPaper00001005
WBPaper00001028
WBPaper00001057
WBPaper00001079
WBPaper00001227
WBPaper00001404
WBPaper00001416
WBPaper00001433
WBPaper00001526
WBPaper00001558
WBPaper00001573
WBPaper00001612
WBPaper00001638
WBPaper00001649
WBPaper00001667
WBPaper00001677
WBPaper00001691
WBPaper00001706
WBPaper00001709
WBPaper00001720
WBPaper00001738
WBPaper00001745
WBPaper00001748
WBPaper00001768
WBPaper00001852
WBPaper00001869
WBPaper00002206
WBPaper00002226
WBPaper00002374
WBPaper00002459
WBPaper00002497
WBPaper00002534
WBPaper00002627
WBPaper00002802
WBPaper00002827
WBPaper00003401
WBPaper00003403
WBPaper00003454
WBPaper00003719
WBPaper00003910
WBPaper00003923
WBPaper00003924
WBPaper00003927
WBPaper00004213
WBPaper00004396
WBPaper00004435
WBPaper00004476
WBPaper00004489
WBPaper00004883
WBPaper00005138
WBPaper00005237
WBPaper00005567
WBPaper00005921
WBPaper00006110
WBPaper00006389
WBPaper00006390
WBPaper00010626
WBPaper00010692
WBPaper00010714
WBPaper00010982
WBPaper00011094
WBPaper00011731
WBPaper00013698
WBPaper00013858
WBPaper00013865
WBPaper00013953
WBPaper00014013
WBPaper00014081
WBPaper00014084
WBPaper00014182
WBPaper00014205
WBPaper00014208
WBPaper00014210
WBPaper00014230
WBPaper00014393
WBPaper00014443
WBPaper00014503
WBPaper00014519
WBPaper00014708
WBPaper00014709
WBPaper00014911
WBPaper00014922
WBPaper00014999
WBPaper00015048
WBPaper00015229
WBPaper00015355
WBPaper00015397
WBPaper00015590
WBPaper00015660
WBPaper00015943
WBPaper00016028
WBPaper00016077
WBPaper00016084
WBPaper00016131
WBPaper00016149
WBPaper00016180
WBPaper00016216
WBPaper00016247
WBPaper00016289
WBPaper00016311
WBPaper00016314
WBPaper00016397
WBPaper00016421
WBPaper00016425
WBPaper00016503
WBPaper00016513
WBPaper00016555
WBPaper00016928
WBPaper00017039
WBPaper00017050
WBPaper00017502
WBPaper00017507
WBPaper00017613
WBPaper00017688
WBPaper00017745
WBPaper00017875
WBPaper00018078
WBPaper00018097
WBPaper00018315
WBPaper00018749
WBPaper00018766
WBPaper00019458
WBPaper00019666
WBPaper00021083
WBPaper00021709
WBPaper00021812
WBPaper00021818
WBPaper00021912
WBPaper00021988
WBPaper00022124
WBPaper00022265
WBPaper00022275
WBPaper00022362
WBPaper00022633
WBPaper00022720
WBPaper00022894
WBPaper00023429
WBPaper00023452
WBPaper00023825
WBPaper00024323
WBPaper00024329
WBPaper00024428
WBPaper00025119
WBPaper00025577
WBPaper00026418
WBPaper00026477
WBPaper00027236
WBPaper00027716
WBPaper00027757
WBPaper00027832
WBPaper00028104
WBPaper00029013
WBPaper00030145
WBPaper00030672
WBPaper00030837
WBPaper00030887
WBPaper00031432
WBPaper00031484
WBPaper00031510
WBPaper00031689
WBPaper00031871
WBPaper00032050
WBPaper00032266
WBPaper00034110
WBPaper00034402
WBPaper00034408
WBPaper00037367
WBPaper00037376
WBPaper00038542
WBPaper00038687
WBPaper00038703
WBPaper00039045
WBPaper00041537
WBPaper00042677
WBPaper00043275
WBPaper00043757
WBPaper00044269
WBPaper00047290
WBPaper00047291
WBPaper00047919
WBPaper00048558
WBPaper00048917
WBPaper00049555
WBPaper00050180
WBPaper00052031
WBPaper00053311
WBPaper00053312
WBPaper00053313
WBPaper00053325
WBPaper00054685
WBPaper00055216
WBPaper00055321
WBPaper00056598
WBPaper00056672
WBPaper00056982
WBPaper00057798
WBPaper00059179
WBPaper00059520
WBPaper00059578
WBPaper00059854
WBPaper00060130
WBPaper00060545
WBPaper00061871
WBPaper00062189
WBPaper00062457
WBPaper00062715
WBPaper00063123
WBPaper00063882
WBPaper00063926
WBPaper00063946
WBPaper00064233
WBPaper00064242
WBPaper00064502
WBPaper00064660
WBPaper00064694
WBPaper00064805
WBPaper00065100
WBPaper00065228
WBPaper00065847
RemarkThis locus was previously connected to Y54G2A.1 which was a mistake [030212 krb]
MethodGene