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WormBase Tree Display for Gene: WBGene00001864

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Name Class

WBGene00001864SMapS_parentSequenceD1086
IdentityVersion2
NameCGC_namehim-5Person_evidenceWBPerson261
Sequence_nameD1086.4
Molecular_nameD1086.4a
D1086.4a.1
CE09062
D1086.4b
CE45310
D1086.4b.1
Other_nameCELE_D1086.4Accession_evidenceNDBBX284605
Public_namehim-5
DB_infoDatabaseWormQTLgeneWBGene00001864
WormFluxgeneWBGene00001864
NDBlocus_tagCELE_D1086.4
NCBIgene183932
RefSeqproteinNM_001269627.3
NM_001269626.2
TrEMBLUniProtAccO17724
E1B6V2
UniProt_GCRPUniProtAccO17724
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
222 Aug 2008 17:09:12WBPerson2970EventAcquires_mergeWBGene00008391
Name_changeSequence_nameD1086.4
Acquires_mergeWBGene00008391
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhim
Reference_alleleWBVar00144023
Allele (43)
Legacy_informatione1467ts : at 20x self-progeny 16% XO male 11% ova are nullo-X as a result of reductional meiotic nondisjunction; X chromosome recombination specifically reduced 50%. ES3 (progeny). ME3. NA2 (e1490 (stronger allele : 33% Him at 20x)).
See also e1467, e1490
[C.elegansII] e1467ts : at 20C self-progeny 16% XO male, 3% 3X herm, 11% ova are nullo-X as a result of reductional meiotic nondisjunction; X chromosome recombination specifically reduced 50% or more, except at left end (increased); additional sterility not due to autosomal nondisjunction ( brood reduced 64% at 25C); some embryonic lethality. ES3 (progeny). ME3. OA4: e1490 (stronger allele : 33% Him at 20C)). Cloned: cosmid rescue K02A12. [Hodgkin et al. 1979; Broverman and Meneely 1994; FH]
StrainWBStrain00008586
WBStrain00022625
WBStrain00022626
WBStrain00022834
WBStrain00022835
WBStrain00022837
WBStrain00023475
WBStrain00024033
WBStrain00024073
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WBStrain00000057
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WBStrain00000422
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WBStrain00000386
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WBStrain00004641
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WBStrain00004801
WBStrain00004816
WBStrain00004802
WBStrain00004819
WBStrain00004803
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WBStrain00004804
WBStrain00004825
WBStrain00004827
WBStrain00004829
WBStrain00004806
WBStrain00004830
WBStrain00004807
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WBStrain00004923
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WBStrain00004924
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WBStrain00004931
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WBStrain00005056
WBStrain00005095
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WBStrain00005058
WBStrain00005145
WBStrain00005146
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WBStrain00005265
WBStrain00005521
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WBStrain00005638
WBStrain00006269
WBStrain00006410
WBStrain00006847
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WBStrain00006967
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WBStrain00006969
WBStrain00006970
WBStrain00007103
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WBStrain00007159
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WBStrain00007161
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WBStrain00007163
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WBStrain00007166
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WBStrain00007186
WBStrain00007187
WBStrain00007153
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WBStrain00007195
WBStrain00007196
WBStrain00007158
WBStrain00007368
WBStrain00007450
WBStrain00007451
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WBStrain00007740
WBStrain00008009
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WBStrain00008469
WBStrain00008470
WBStrain00008576
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WBStrain00008581
WBStrain00008582
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WBStrain00008596
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WBStrain00008580
WBStrain00008592
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WBStrain00008612
WBStrain00029797
WBStrain00029801
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WBStrain00029827
WBStrain00029795
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WBStrain00029803
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WBStrain00029767
WBStrain00029909
WBStrain00029876
WBStrain00029802
WBStrain00029806
WBStrain00029784
WBStrain00029812
WBStrain00029923
WBStrain00029894
WBStrain00029838
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WBStrain00029879
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WBStrain00029783
WBStrain00029848
WBStrain00029759
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WBStrain00029769
WBStrain00029840
WBStrain00029730
WBStrain00029807
WBStrain00029912
WBStrain00029888
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WBStrain00029791
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WBStrain00029883
WBStrain00031118
WBStrain00029897
WBStrain00029878
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WBStrain00029779
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WBStrain00029910
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WBStrain00029915
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WBStrain00029819
WBStrain00029799
WBStrain00029918
WBStrain00029832
WBStrain00029822
WBStrain00029901
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WBStrain00029880
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WBStrain00029789
WBStrain00029805
WBStrain00031120
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WBStrain00029917
WBStrain00029794
WBStrain00029811
WBStrain00029841
WBStrain00029887
WBStrain00029762
WBStrain00029758
WBStrain00029921
WBStrain00029826
WBStrain00029844
WBStrain00029916
WBStrain00029816
WBStrain00029908
WBStrain00029813
WBStrain00029881
WBStrain00029907
WBStrain00029913
WBStrain00029823
WBStrain00029851
WBStrain00029765
WBStrain00029808
WBStrain00029751
WBStrain00029814
WBStrain00029922
WBStrain00029846
WBStrain00029900
WBStrain00029911
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WBStrain00029810
WBStrain00029764
WBStrain00029891
WBStrain00029824
WBStrain00033367
WBStrain00029895
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WBStrain00029882
WBStrain00029798
WBStrain00029831
WBStrain00029821
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WBStrain00029820
WBStrain00029914
WBStrain00029828
WBStrain00029753
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WBStrain00029786
WBStrain00029829
WBStrain00029849
WBStrain00029850
WBStrain00029804
WBStrain00029845
WBStrain00029904
WBStrain00029934
WBStrain00030973
WBStrain00047284
WBStrain00022479
WBStrain00042531
WBStrain00047321
WBStrain00047412
WBStrain00047322
WBStrain00047400
WBStrain00047443
WBStrain00047409
WBStrain00047413
WBStrain00047411
WBStrain00049794
WBStrain00050643
WBStrain00049322
WBStrain00051571
WBStrain00051719
WBStrain00051867
WBStrain00051836
WBStrain00055031
WBStrain00055033
WBStrain00054879
WBStrain00055026
WBStrain00055048
WBStrain00055029
WBStrain00054633
WBStrain00055010
WBStrain00055325
WBStrain00054634
WBStrain00055402
WBStrain00054635
WBStrain00054878
WBStrain00055030
WBStrain00055032
WBStrain00054733
WBStrain00055329
WBStrain00055334
WBStrain00055023
WBStrain00054877
RNASeq_FPKM (74)
GO_annotation00008104
00030516
00030517
00030518
OrthologchrV_pilon.g16429Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionhim-5 was identified in screens for genes that when mutated resulted in an increased frequency of X chromosome nondisjunction and thus, an increased frequency of genotypically XO males in self-fertile populations; him-5 functions in X chromosome dynamics by regulating the number and distribution of X chromosome pairing events.Paper_evidenceWBPaper00000179
WBPaper00001852
Curator_confirmedWBPerson1843
Date_last_updated28 Oct 2010 00:00:00
Automated_descriptionInvolved in meiotic DNA double-strand break formation involved in reciprocal meiotic recombination and meiotic chromosome segregation. Located in condensed chromosome. Expressed in gonad.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD1086.4a
D1086.4b
Corresponding_transcriptD1086.4a.1
D1086.4b.1
Associated_featureWBsf647510
WBsf232867
WBsf232868
WBsf232869
Experimental_infoRNAi_resultWBRNAi00030368Inferred_automaticallyRNAi_primary
WBRNAi00111474Inferred_automaticallyRNAi_primary
WBRNAi00012552Inferred_automaticallyRNAi_primary
WBRNAi00061770Inferred_automaticallyRNAi_primary
WBRNAi00043422Inferred_automaticallyRNAi_primary
WBRNAi00111473Inferred_automaticallyRNAi_primary
Expr_patternExpr9917
Expr1023729
Expr1031097
Expr1147415
Expr2012430
Expr2030666
Drives_constructWBCnstr00036641
WBCnstr00038151
Construct_productWBCnstr00036641
WBCnstr00038150
WBCnstr00038151
Microarray_results (18)
Expression_cluster (137)
Interaction (68)
Map_infoMapVPosition6.09216Error0.018285
Well_ordered
PositivePositive_cloneD1086Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point308
6177
Multi_point (33)
Pos_neg_data1761
4301
6866
7401
Landmark_gene
Reference (239)
RemarkThis locus was previously connected to Y54G2A.1 which was a mistake [030212 krb]
MethodGene