WormBase Tree Display for Gene: WBGene00006770
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| WBGene00006770 | SMap | S_parent | Sequence | Y50D4C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | unc-34 | Person_evidence | WBPerson261 | |||||
| Sequence_name | Y50D4C.1 | ||||||||
| Molecular_name (21) | |||||||||
| Other_name | CELE_Y50D4C.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | unc-34 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:42 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 02 Mar 2018 11:09:16 | WBPerson4025 | Event | Split_into | WBGene00303091 | ||||
| Split_into | WBGene00303091 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| Reference_allele | WBVar00143110 | ||||||||
| Allele (349) | |||||||||
| Legacy_information | e315ts : at 20x fairly severe coiler somewhat active grows well; male has crumpled copulatory spicules; variable defects in VD and DD commissures; at 15x moves much better. ES3 (20x) ME0. NA3 (e566 e951pdi : non-ts alleles coilers at all temperatures; e566 strongest allele). | ||||||||
| See also s138 | |||||||||
| [C.elegansII] e315ts : at 20C fairly severe coiler, somewhat active, grows well; male has crumpled copulatory spicules; variable defects in VD and DD commissures; At 15C moves much better. Low penetrance withered tail phenotype (CAN cell defect),and excretory cell abnormalities.ES3 (20C) ME0. OA>5: e566, (strongest allele,non-ts, coils at all temperatures; defects in axonal elongation and fasciculation), e951pdi, s138gri, etc. [Brenner 1974; McIntire et al. 1992; CX; NG; NW; MT] | |||||||||
| Strain | WBStrain00022543 | ||||||||
| WBStrain00024076 | |||||||||
| WBStrain00024143 | |||||||||
| WBStrain00027135 | |||||||||
| WBStrain00027253 | |||||||||
| WBStrain00031248 | |||||||||
| WBStrain00004147 | |||||||||
| WBStrain00004181 | |||||||||
| WBStrain00051845 | |||||||||
| WBStrain00053139 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (45) | |||||||||
| Structured_description | Concise_description | unc-34 encodes an EVH1 domain-containing protein that is the sole C. elegans Enabled/VASP homolog; during development, unc-34 activity is required for proper cell migration and axon guidance and for normal locomotion and posterior body morphology; in regulating axon guidance, genetic analyses suggest that unc-34 likely functions downstream of slt-1/Slit and sax-3/Robo as well as unc-6/Netrin and unc-40/DCC, but in parallel to Rac GTPases and mig-15/NIK; in addition, UNC-34 binds MIG-10/RIAM/Lamellipodin in vitro, suggesting that UNC-34 functions as a link between external guidance cues and axon outgrowth; a functional UNC-34::GFP fusion protein localizes to the tips of filopodia in both dorsal and ventral domains of the HSN neuron. | Paper_evidence | WBPaper00005544 | |||||
| WBPaper00005719 | |||||||||
| WBPaper00024256 | |||||||||
| WBPaper00026842 | |||||||||
| WBPaper00027144 | |||||||||
| WBPaper00027185 | |||||||||
| WBPaper00027328 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 27 Feb 2007 00:00:00 | ||||||||
| Automated_description | Enables signaling receptor binding activity. Involved in axon development; gonad morphogenesis; and positive regulation of locomotion. Located in several cellular components, including cell junction; cell leading edge; and filopodium tip. Expressed in epithelial cell. Used to study tauopathy. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Is an ortholog of human ENAH (ENAH actin regulator) and EVL (Enah/Vasp-like). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:680 | Homo sapiens | Paper_evidence | WBPaper00030773 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 15 Oct 2018 00:00:00 | ||||||||
| Potential_model | DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18271) | |||||
| Models_disease_asserted | WBDOannot00000620 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4C.1a | |||||||
| Y50D4C.1b | |||||||||
| Y50D4C.1c | |||||||||
| Y50D4C.1d | |||||||||
| Y50D4C.1e | |||||||||
| Y50D4C.1f | |||||||||
| Y50D4C.1g | |||||||||
| Corresponding_CDS_history | Y50D4C.1:wp90 | ||||||||
| Y50D4C.1a:wp196 | |||||||||
| Y50D4C.1h:wp264 | |||||||||
| Corresponding_transcript | Y50D4C.1a.1 | ||||||||
| Y50D4C.1b.1 | |||||||||
| Y50D4C.1c.1 | |||||||||
| Y50D4C.1d.1 | |||||||||
| Y50D4C.1e.1 | |||||||||
| Y50D4C.1f.1 | |||||||||
| Y50D4C.1g.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info (11) | |||||||||
| Map_info | Map | V | Position | -19.8783 | Error | 0.017009 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | yDp1 | |||||||
| Positive_clone | Y50D4C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | 2_point | 124 | |||||||
| 586 | |||||||||
| 1731 | |||||||||
| 3138 | |||||||||
| 3145 | |||||||||
| 6113 | |||||||||
| Multi_point (18) | |||||||||
| Pos_neg_data | 3089 | ||||||||
| 3095 | |||||||||
| 3104 | |||||||||
| 3396 | |||||||||
| 3146 | |||||||||
| 3147 | |||||||||
| 5194 | |||||||||
| 3258 | |||||||||
| Reference (145) | |||||||||
| Method | Gene |
