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WormBase Tree Display for Gene: WBGene00027004

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Name Class

WBGene00027004SMapS_parentSequencecb25.fpc0072a
IdentityVersion4
NameCGC_nameCbr-asfl-1From_analysisInferred_from_orthology
Sequence_nameCBG04296
Molecular_nameCBG04296
CBG04296.1
CBP06715
Other_nameCbr-asf-1From_analysisInferred_from_orthology
CBG_04296Accession_evidenceNDBHE600920
Cbr-unc-85From_analysisInferred_from_orthology
Public_nameCbr-asfl-1
DB_infoDatabaseNDBlocus_tagCBG_04296
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:47WBPerson2970Name_changeCGC_nameCbr-asf-1
305 Jun 2008 15:20:05WBPerson2970Name_changeCGC_nameCbr-asf-1 -> Cbr-unc-85
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-asfl-1
Other_nameCbr-unc-85
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classasfl
RNASeq_FPKMWBls:0000002125.36From_analysisRNASeq.briggsae.WBls:0000002.control_mean
128.558From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
173.739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
73.7827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
148.952From_analysisRNASeq.briggsae.WBls:0000002.control_mean
151.148From_analysisRNASeq.briggsae.WBls:0000002.control_median
219.727From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003420.098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
455.159From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
490.219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
428.849From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
446.389From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004109.928From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
111.863From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
113.798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
115.97From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
118.998From_analysisRNASeq.briggsae.WBls:0000004.control_mean
127.258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
128.037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.7923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.2431From_analysisRNASeq.briggsae.WBls:0000027.control_mean
30.2651From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
40.6718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
30.7732From_analysisRNASeq.briggsae.WBls:0000027.control_mean
35.4684From_analysisRNASeq.briggsae.WBls:0000027.control_median
41.3636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003547.3481From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003829.9423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
38.847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
46.3929From_analysisRNASeq.briggsae.WBls:0000038.control_median
50.1639From_analysisRNASeq.briggsae.WBls:0000038.control_mean
53.9389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
77.9275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:0000041188.723From_analysisRNASeq.briggsae.WBls:0000041.control_mean
223.694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
226.277From_analysisRNASeq.briggsae.WBls:0000041.control_median
228.861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
235.746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
66.5918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
104.029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
159.127From_analysisRNASeq.briggsae.WBls:0000041.control_mean
163.861From_analysisRNASeq.briggsae.WBls:0000041.control_median
95.8408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063105.34From_analysisRNASeq.briggsae.WBls:0000063.control_mean
110.854From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
161.568From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
81.1587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
85.1888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
87.9328From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
114.124From_analysisRNASeq.briggsae.WBls:0000063.control_mean
158.043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
99.3934From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101116.989From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
81.1587From_analysisRNASeq.briggsae.total_over_all_stages.control_median
126.627From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
96.9792From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00130638
00130639
00130640
00130641
00130642
Ortholog (38)
Structured_descriptionAutomated_descriptionPredicted to enable histone binding activity. Predicted to be involved in nucleosome assembly and nucleosome disassembly. Predicted to be located in nucleus. Is an ortholog of C. elegans asfl-1. In C. elegans, asfl-1 is involved in DNA replication and multicellular organismal reproductive process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04296
Corresponding_CDS_historyCBG04296:bp194
Corresponding_transcriptCBG04296.1
Other_sequence (31)
Experimental_infoExpr_patternExpr1055038
Microarray_resultsGPL8303_CB6_WBGene00027004_A
GPL8303_CB6_WBGene00027004_B
GPL8303_CB6_WBGene00027004_C
GPL14143_CBG04296_31-90_0.811_14_C
GPL14143_CBG04296_214-273_0.556_101_B
GPL14143_CBG04296_302-361_0.777_23_A
MethodGene