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WormBase Tree Display for Gene: WBGene00029076

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Name Class

WBGene00029076SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-unc-32From_analysisInferred_from_orthology
Sequence_nameCBG06881
Molecular_name (12)
Other_nameCBG_06881Accession_evidenceNDBHE601347
Public_nameCbr-unc-32
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-32
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00007029
RNASeq_FPKMWBls:000000254.5831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
62.9624From_analysisRNASeq.briggsae.WBls:0000002.control_mean
65.4832From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
68.821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
45.8285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
58.679From_analysisRNASeq.briggsae.WBls:0000002.control_mean
60.0331From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:0000003131.726From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
143.099From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
154.472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
147.248From_analysisRNASeq.briggsae.WBls:0000003.control_mean
155.545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004108.851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
114.814From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
120.777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
110.285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
115.992From_analysisRNASeq.briggsae.WBls:0000004.control_mean
119.936From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
120.113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027132.291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
27.7319From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
56.2796From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.81586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
50.3987From_analysisRNASeq.briggsae.WBls:0000027.control_median
60.476From_analysisRNASeq.briggsae.WBls:0000027.control_mean
73.0654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003564.9539From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003829.7958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
46.9876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
57.1197From_analysisRNASeq.briggsae.WBls:0000038.control_mean
57.5613From_analysisRNASeq.briggsae.WBls:0000038.control_median
68.135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
83.5602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004172.0042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
75.0175From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
75.7887From_analysisRNASeq.briggsae.WBls:0000041.control_median
76.5599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
77.1311From_analysisRNASeq.briggsae.WBls:0000041.control_mean
84.9428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
80.0747From_analysisRNASeq.briggsae.WBls:0000041.control_mean
80.3779From_analysisRNASeq.briggsae.WBls:0000041.control_median
84.1958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
87.728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006337.7945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
38.7055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
38.7545From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
39.9051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
45.1282From_analysisRNASeq.briggsae.WBls:0000063.control_mean
70.4816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
39.3298From_analysisRNASeq.briggsae.WBls:0000063.control_median
45.1971From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.5414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010168.821From_analysisRNASeq.briggsae.total_over_all_stages.control_median
69.9756From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
72.5348From_analysisRNASeq.briggsae.total_over_all_stages.control_median
75.5666From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132404
00132405
00132406
00132407
Ortholog (32)
ParalogWBGene00024808Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025861Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026344Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; defense response to Gram-positive bacterium; and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06881a
CBG06881b
CBG06881c
CBG06881d
Corresponding_CDS_historyCBG06881:bp194
CBG06881:bp255
Corresponding_transcriptCBG06881a.1
CBG06881b.1
CBG06881c.1
CBG06881d.1
Other_sequence (87)
Experimental_infoExpr_patternExpr1053530
Microarray_resultsGPL8303_CB6_WBGene00029076_A
GPL8303_CB6_WBGene00029076_B
GPL14143_CBG06881_2258-2317_0.906_6_B
GPL14143_CBG06881_2731-2790_0.880_19_A
ReferenceWBPaper00042088
MethodGene