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WormBase Tree Display for Gene: WBGene00030075

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Name Class

WBGene00030075SMapS_parentSequencecb25.fpc1417
IdentityVersion2
NameCGC_nameCbr-unc-55From_analysisInferred_from_orthology
Sequence_nameCBG08244
Molecular_nameCBG08244a
CBG08244a.1
CBP41953
CBG08244b
CBP39385
CBG08244c
CBP45089
CBG08244b.1
CBG08244c.1
Other_nameCBG_08244Accession_evidenceNDBHE601064
Public_nameCbr-unc-55
DB_infoDatabaseNDBlocus_tagCBG_08244
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-unc-55
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00113239
WBVar00113240
WBVar00113241
WBVar00113235
WBVar00113242
WBVar00113236
WBVar00113237
WBVar00113243
WBVar00113238
WBVar00113244
RNASeq_FPKMWBls:00000021.46393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.12541From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.14781From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.85409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.5033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.81436From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.98668From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.160204From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.320408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.260942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.264701From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.326123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.41603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (11)
WBls:00000271.10373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.6496From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.63074From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.79469From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.52235From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.94951From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.41396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000352.87423From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.552519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.34501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.43423From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.52345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.65326From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.19206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.188033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.192815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.264919From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.337024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.36995From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.76191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.54947From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.04583From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.80301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6.99218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.328553From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.750006From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.939585From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.08821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.39368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.449148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.694367From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.699863From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001010.939585From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.46525From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.746052From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.67518From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133480
00133481
00133482
00133483
Ortholog (26)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-55. In C. elegans, unc-55 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08244a
CBG08244b
CBG08244c
Corresponding_CDS_historyCBG08244:bp194
CBG08244:bp202
CBG08244a:bp255
CBG08244b:bp255
Corresponding_transcriptCBG08244a.1
CBG08244b.1
CBG08244c.1
Other_sequenceCJC05575_1
Experimental_infoExpr_patternExpr1069375
Microarray_resultsGPL8303_CB6_WBGene00030075_A
GPL8303_CB6_WBGene00030075_B
GPL14143_CBG08244_266-325_0.915_2_C
GPL14143_CBG08244_346-405_0.908_3_A
GPL14143_CBG08244_697-756_0.649_97_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
ReferenceWBPaper00050135
MethodGene