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WormBase Tree Display for Gene: WBGene00031320

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Name Class

WBGene00031320SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-unc-47From_analysisInferred_from_orthology
Sequence_nameCBG09800
Molecular_nameCBG09800
CBG09800.1
CBP24904
Other_nameCBG_09800Accession_evidenceNDBHE601459
Public_nameCbr-unc-47
DB_infoDatabaseNDBlocus_tagCBG_09800
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000022.06747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.08495From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.34379From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.87896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.87317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.57621From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.97614From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.420706From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.841412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.280471From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.81502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.55551From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.29599From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
4.1286From_analysisRNASeq.briggsae.WBls:0000004.control_mean
4.19817From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.57077From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.76303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.220283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.57028From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.95192From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.06521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
11.0411From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.31775From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.97422From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000355.16051From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.337693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.93557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.08112From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.16818From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.40079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.65043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.225121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.23285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.244947From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.257044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.699254From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.702832From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.883112From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.14862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.35304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.451023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.476593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.552084From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.593965From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.596467From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.90867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.573025From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.699843From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.21672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.93557From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.48924From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.90437From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.69349From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (31)
Paralog (16)
Structured_descriptionAutomated_descriptionExpressed in GABAergic neurons; SDQL; and SDQR. Is predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans unc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09800
Corresponding_CDS_historyCBG09800:bp167
Corresponding_transcriptCBG09800.1
Other_sequence (13)
Experimental_infoExpr_patternExpr10561
Expr1053705
Drives_constructWBCnstr00018302
Microarray_resultsGPL8303_CB6_WBGene00031320_A
GPL8303_CB6_WBGene00031320_B
GPL14143_CBG09800_1072-1131_0.933_2_C
GPL14143_CBG09800_1151-1210_0.931_3_B
GPL14143_CBG09800_1379-1438_0.840_59_A
InteractionWBInteraction000524190
ReferenceWBPaper00038509
WBPaper00046856
MethodGene