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WormBase Tree Display for Gene: WBGene00032168

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Name Class

WBGene00032168SMapS_parentSequencecb25.fpc2397
IdentityVersion2
NameCGC_nameCbr-unc-6From_analysisInferred_from_orthology
Sequence_nameCBG10925
Molecular_nameCBG10925
CBG10925.1
CBP02662
Other_nameCBG_10925Accession_evidenceNDBHE601482
Public_nameCbr-unc-6
DB_infoDatabaseNDBlocus_tagCBG_10925
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00116311
WBVar00116312
WBVar00116310
RNASeq_FPKMWBls:00000023.77823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.66991From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.47397From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.75753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.19544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.55129From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.6261From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000337.217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
37.5596From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
37.9021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
39.1816From_analysisRNASeq.briggsae.WBls:0000003.control_mean
42.4258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000466.375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
67.8566From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
69.3381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
67.4839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
70.2784From_analysisRNASeq.briggsae.WBls:0000004.control_mean
70.4645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
77.7303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002720.7933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.37211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
4.66082From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.27541From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.7271From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.8017From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.3804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.2718From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
12.0873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.96729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.28525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
8.25991From_analysisRNASeq.briggsae.WBls:0000038.control_mean
8.99253From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000411.24164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.42528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.49385From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.56242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.47334From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.66403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.44299From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.82838From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.32356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.75335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.48133From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.56042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.65707From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.67897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.51018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.62001From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.66802From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.31344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.4672From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
7.28525From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.1216From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.37961From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (31)
ParalogWBGene00027029Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027093Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029573Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032203Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032251Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032318Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042278Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042473Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin-type EGF domain; Tissue inhibitor of metalloproteinases-like, OB-fold; Netrin module, non-TIMP type; Laminin EGF domain; and Laminin N-terminal (Domain VI). Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG10925
Corresponding_CDS_historyCBG10925:bp194
CBG10925:bp255
Corresponding_transcriptCBG10925.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1054646
Microarray_resultsGPL8303_CB6_WBGene00032168_A
GPL8303_CB6_WBGene00032168_B
GPL8303_CB6_WBGene00032168_C
GPL8303_CB6_WBGene00032168_D
GPL8303_CB6_WBGene00032168_E
GPL14143_CBG10925_760-819_0.798_3_B
GPL14143_CBG10925_823-882_0.789_11_C
GPL14143_CBG10925_853-912_0.725_57_A
MethodGene