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WormBase Tree Display for Gene: WBGene00033078

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Name Class

WBGene00033078SMapS_parentSequencecb25.fpc2852
IdentityVersion4
NameCGC_nameCbr-unc-89From_analysisInferred_from_orthology
Sequence_nameCBG12070
Molecular_name (19)
Other_nameCBG_12070Accession_evidenceNDBHE601540
CBG_12069
CBG_26591
Public_nameCbr-unc-89
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:53WBPerson2970Name_changeCGC_nameCbr-unc-89
311 Jan 2018 16:44:22WBPerson4025EventAcquires_mergeWBGene00033077
411 Jan 2018 16:44:22WBPerson4025EventAcquires_mergeWBGene00088005
Acquires_mergeWBGene00033077
WBGene00088005
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Allele (20)
RNASeq_FPKMWBls:000000227.1426From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.3267From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
39.2905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9.81071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.3015From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
24.9324From_analysisRNASeq.briggsae.WBls:0000002.control_mean
25.3141From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.302522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.3365From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.37048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.48067From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.76902From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000410.0538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
9.74324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.89852From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
10.5132From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
10.5923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.676From_analysisRNASeq.briggsae.WBls:0000004.control_mean
12.4772From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002719.768From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
31.5834From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.16858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
68.8137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
38.1845From_analysisRNASeq.briggsae.WBls:0000027.control_mean
38.8778From_analysisRNASeq.briggsae.WBls:0000027.control_median
57.9876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003541.825From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.1945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
29.9921From_analysisRNASeq.briggsae.WBls:0000038.control_mean
34.1988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
34.6529From_analysisRNASeq.briggsae.WBls:0000038.control_median
35.1069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
37.4682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004112.7402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
14.5454From_analysisRNASeq.briggsae.WBls:0000041.control_median
16.3506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
17.0974From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.5228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.77602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
15.5182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
15.9344From_analysisRNASeq.briggsae.WBls:0000041.control_median
19.3368From_analysisRNASeq.briggsae.WBls:0000041.control_mean
32.1132From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006317.3578From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.9071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.9633From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
21.7453From_analysisRNASeq.briggsae.WBls:0000063.control_mean
22.0288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
32.4695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.496From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.1604From_analysisRNASeq.briggsae.WBls:0000063.control_mean
24.2358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010119.768From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.3475From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
18.6324From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.1733From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136423
00136424
00136425
00136426
Ortholog (51)
ParalogWBGene00028512Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028613Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035708Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036095Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036118Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036696Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036697Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037145Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038458Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; guanyl-nucleotide exchange factor activity; and protein kinase activity. Is an ortholog of C. elegans unc-89. In C. elegans, unc-89 is involved in several processes, including myofibril assembly; pharyngeal gland morphogenesis; and regulation of striated muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12070a
CBG12070b
CBG12070c
CBG12070d
CBG12070e
CBG12070f
Corresponding_CDS_historyCBG12070a:bp263
CBG12070d:bp263
CBG12070e:bp263
Corresponding_transcriptCBG12070a.1
CBG12070b.1
CBG12070b.2
CBG12070c.1
CBG12070d.1
CBG12070e.1
CBG12070f.1
Other_sequence (201)
Experimental_infoExpr_patternExpr1054339
Expr1055828
Expr1069038
Microarray_resultsGPL8303_CB6_WBGene00033077_A
GPL8303_CB6_WBGene00033077_B
GPL8303_CB6_WBGene00033078_A
GPL14143_CBG12069_3073-3132_0.803_109_C
GPL14143_CBG12069_3252-3311_0.846_55_A
GPL14143_CBG12069_4657-4716_0.755_229_B
GPL14143_CBG12070_18430-18489_0.828_105_C
GPL14143_CBG12070_19338-19397_0.944_1_B
GPL14143_CBG12070_19394-19453_0.908_24_A
GPL14143_CBG26591_209-268_0.897_1_A
MethodGene