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WormBase Tree Display for Gene: WBGene00033345

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Name Class

WBGene00033345SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-unc-29From_analysisInferred_from_orthology
Sequence_nameCBG12389
Molecular_nameCBG12389
CBG12389.1
CBP17506
Other_nameCBG_12389Accession_evidenceNDBHE600913
Public_nameCbr-unc-29
DB_infoDatabaseNDBlocus_tagCBG_12389
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-29
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000022.336From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.9468From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.0494From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.19008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.50762From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.6927From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000031.0695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1.21125From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.35301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.584201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.00224From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000410.5256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
11.0602From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.5948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.089From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.19325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
8.54135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.9888From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.2511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.596937From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.0585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.63551From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.90298From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.02889From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.20903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.01547From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.336974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.40808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.59005From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.07628From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.77202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.78805From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.78423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.858225From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.942288From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.02635From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.30961From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.56962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.13946From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.25258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.38829From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.83875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.662755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.16017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.42604From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.43672From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.40664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.38172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
1.40388From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.42755From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.40664From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.2965From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.37132From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.6547From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136704
00136705
00136706
00136707
00136708
00136709
00136710
00136711
Ortholog (38)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-29. In C. elegans, unc-29 is involved in several processes, including neuromuscular synaptic transmission; positive regulation of acetylcholine secretion, neurotransmission; and regulation of multicellular organismal process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12389
Corresponding_CDS_historyCBG12389:bp194
Corresponding_transcriptCBG12389.1
Other_sequence (45)
Experimental_infoExpr_patternExpr1058070
Microarray_resultsGPL8303_CB6_WBGene00033345_A
GPL8303_CB6_WBGene00033345_B
GPL14143_CBG12389_1057-1116_0.918_10_C
GPL14143_CBG12389_1198-1257_0.929_5_A
GPL14143_CBG12389_1383-1442_0.875_26_B
MethodGene