WormBase Tree Display for Gene: WBGene00034778

WBGene00034778 SMap: S_parent: Sequence: cb25.fpc3857a
  Identity: Version: 2
    Name: CGC_name: Cbr-unc-78 From_analysis: Inferred_from_orthology
      Sequence_name: CBG14204
      Molecular_name: CBG14204
        CBG14204.1
        CBP03474
      Other_name: CBG_14204 Accession_evidence: NDB HE600983
      Public_name: Cbr-unc-78
    DB_info: Database: NDB locus_tag CBG_14204
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:04 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-unc-78
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 10.1978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        2.81991 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        4.43348 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        5.81706 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.954773 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        3.62669 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        4.60149 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 5.06185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        5.09324 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        5.12462 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        6.22971 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        8.50266 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 42.5466 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        42.9096 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        43.2727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        42.6332 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        42.8824 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        43.2407 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        44.8684 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 10.5677 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        25.4676 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.22187 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        62.6131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        17.8341 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        25.1005 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        25.3758 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 40.7871 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 12.4074 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        28.479 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        30.4935 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        33.0807 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        37.6824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        43.405 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 1.49088 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1.6571 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1.82333 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        21.6507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        6.24123 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        11.5373 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        11.737 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        21.7615 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        22.4977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        4.35311 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        4.44052 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        5.33114 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        5.71644 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        6.27747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        4.44794 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        4.92205 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        5.1266 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 10.1978 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        17.163 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        11.4875 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        18.7329 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (39)
    Paralog: WBGene00041133 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Anaphase-promoting complex subunit 4, WD40 domain; WD domain, G-beta repeat; Anaphase-promoting complex subunit 4 WD40 domain; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; and WD40 repeat. Is an ortholog of C. elegans unc-78. In C. elegans, unc-78 is involved in several processes, including myofibril assembly; regulation of actin polymerization or depolymerization; and regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG14204
    Corresponding_CDS_history: CBG14204:bp194
    Corresponding_transcript: CBG14204.1
    Other_sequence (49)
  Experimental_info: Expr_pattern: Expr1052145
    Microarray_results: GPL8303_CB6_WBGene00034778_A
      GPL14143_CBG14204_1372-1431_0.812_1_C
      GPL14143_CBG14204_1676-1735_0.795_15_B
      GPL14143_CBG14204_1782-1841_0.759_67_A
  Method: Gene