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WormBase Tree Display for Gene: WBGene00034998

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Name Class

WBGene00034998SMapS_parentSequencecb25.fpc3857a
IdentityVersion3
NameCGC_nameCbr-lon-2From_analysisInferred_from_orthology
Sequence_nameCBG14534
Molecular_nameCBG14534
CBG14534.1
CBP32484
Other_nameCBG_14534Accession_evidenceNDBHE600983
Public_nameCbr-lon-2
DB_infoDatabaseNDBlocus_tagCBG_14534
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-lon-2
324 Jul 2008 11:56:44WBPerson1847EventAcquires_mergeWBGene00034997
Acquires_mergeWBGene00034997
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlon
RNASeq_FPKMWBls:000000210.3173From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
10.8183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.67013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.93524From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.40252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.05206From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.49372From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000337.3282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
39.2118From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.0953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
33.9969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
37.4735From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000432.2651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
34.1869From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.1087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
31.584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
33.6091From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
34.8From_analysisRNASeq.briggsae.WBls:0000004.control_mean
40.433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002711.9653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.25605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.18207From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.46781From_analysisRNASeq.briggsae.WBls:0000027.control_mean
15.4363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.57369From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.95993From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.7646From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.8897From_analysisRNASeq.briggsae.WBls:0000038.control_mean
14.2693From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.317From_analysisRNASeq.briggsae.WBls:0000038.control_median
16.3648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
20.3053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.6192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.5185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.30304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
7.67747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.40043From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.6556From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.12339From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
10.1179From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.6377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
13.4474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.82094From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.798From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.4139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.82172From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
9.04332From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.2311From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.14682From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.66429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010110.798From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.284From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.5892From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.3276From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138504
00138505
00138506
Ortholog (21)
Structured_descriptionAutomated_descriptionPredicted to be involved in regulation of signal transduction. Predicted to be located in collagen-containing extracellular matrix and plasma membrane. Is an ortholog of C. elegans lon-2. In C. elegans, lon-2 is involved in several processes, including negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; regulation of cell migration; and regulation of mesodermal cell fate specification.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14534
Corresponding_CDS_historyCBG14534:bp194
Corresponding_transcriptCBG14534.1
Other_sequenceCRC07010_1
CR09868
CGC00490_1
CBC13859_1
CJC03031_1
CRC04307_1
Experimental_infoExpr_patternExpr1050314
Microarray_resultsGPL8303_CB6_WBGene00034997_A
GPL8303_CB6_WBGene00034998_A
GPL14143_CBG14534_681-740_0.756_31_C
GPL14143_CBG14534_793-852_0.795_7_B
GPL14143_CBG14534_1136-1195_0.800_3_A
MethodGene