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WormBase Tree Display for Gene: WBGene00035594

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Name Class

WBGene00035594SMapS_parentSequencecb25.fpc4010
IdentityVersion2
NameCGC_nameCbr-unc-45From_analysisInferred_from_orthology
Sequence_nameCBG15283
Molecular_nameCBG15283
CBG15283.1
CBP03659
Other_nameCBG_15283Accession_evidenceNDBHE601055
Public_nameCbr-unc-45
DB_infoDatabaseNDBlocus_tagCBG_15283
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-45
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000221.4094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
30.9427From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.2476From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
39.1712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
21.7318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
26.9897From_analysisRNASeq.briggsae.WBls:0000002.control_median
28.64From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000321.8012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
25.858From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.9149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
27.6282From_analysisRNASeq.briggsae.WBls:0000003.control_mean
31.1684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000456.002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
58.4398From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
60.8775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
55.126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
55.202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
56.0895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
56.6594From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002712.6463From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.827From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.60725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
61.2274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
36.9369From_analysisRNASeq.briggsae.WBls:0000027.control_median
41.1547From_analysisRNASeq.briggsae.WBls:0000027.control_mean
87.138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003533.1279From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.173From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
31.4911From_analysisRNASeq.briggsae.WBls:0000038.control_mean
33.162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
33.4199From_analysisRNASeq.briggsae.WBls:0000038.control_median
33.6778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
44.9515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004132.8179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
38.6551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
38.7119From_analysisRNASeq.briggsae.WBls:0000041.control_mean
39.5911From_analysisRNASeq.briggsae.WBls:0000041.control_median
40.5272From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
42.8475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
34.8798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
38.8251From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.2228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006320.0612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
20.4959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
20.9137From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
24.1607From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.5512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
33.7815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
23.2325From_analysisRNASeq.briggsae.WBls:0000063.control_median
24.4144From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010131.4947From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
33.1279From_analysisRNASeq.briggsae.total_over_all_stages.control_median
33.4199From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.8312From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0954
Ortholog (34)
ParalogWBGene00025351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025500Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027123Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033483Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087869Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Myosin-binding striated muscle assembly central; UNC-45/Cro1/She4, central domain; Tetratricopeptide repeat; Armadillo-like helical; Tetratricopeptide-like helical domain superfamily; and Armadillo-type fold. Is an ortholog of C. elegans unc-45. In C. elegans, unc-45 is involved in several processes, including egg-laying behavior; embryo development; and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15283
Corresponding_CDS_historyCBG15283:bp194
Corresponding_transcriptCBG15283.1
Other_sequence (60)
Experimental_infoExpr_patternExpr1061786
Microarray_resultsGPL8303_CB6_WBGene00035594_A
GPL8303_CB6_WBGene00035594_B
GPL14143_CBG15283_2128-2187_0.885_43_A
GPL14143_CBG15283_2337-2396_0.898_28_B
GPL14143_CBG15283_2519-2578_0.947_3_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene