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WormBase Tree Display for Gene: WBGene00035657

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Name Class

WBGene00035657SMapS_parentSequencecb25.fpc4022
IdentityVersion2
NameCGC_nameCbr-unc-75From_analysisInferred_from_orthology
Sequence_nameCBG15358
Molecular_nameCBG15358
CBG15358.1
CBP33766
Other_nameCBG_15358Accession_evidenceNDBHE601520
Public_nameCbr-unc-75
DB_infoDatabaseNDBlocus_tagCBG_15358
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-unc-75
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Allele (24)
RNASeq_FPKMWBls:000000212.4593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.93781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.98909From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.46207From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.66552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.46345From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.26293From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.65208From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.65518From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
5.65829From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
2.52612From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
3.27883From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000438.7684From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
38.8839From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
38.9995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
39.1328From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
41.4576From_analysisRNASeq.briggsae.WBls:0000004.control_mean
43.7762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
46.6109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002711.8139From_analysisRNASeq.briggsae.WBls:0000027.control_mean
23.4405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.86708From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
9.13428From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.9552From_analysisRNASeq.briggsae.WBls:0000027.control_mean
16.2874From_analysisRNASeq.briggsae.WBls:0000027.control_median
24.379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.2804From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003815.2142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.36545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.23192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.22108From_analysisRNASeq.briggsae.WBls:0000038.control_median
7.00545From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.21023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.740059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.847104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.862523From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.877942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.53387From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.67038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.53545From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.87787From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.19296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.93879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.175551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.220002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.327152From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.515041From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.534489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.31801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.43082From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.687744From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.55126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.65829From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.81363From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.115From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.66433From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00139137
00139138
Ortholog (26)
ParalogWBGene00023974Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024801Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027063Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027836Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027872Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087396Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans unc-75. In C. elegans, unc-75 is involved in several processes, including cholinergic synaptic transmission; positive regulation of synaptic transmission; and regulation of alternative mRNA splicing, via spliceosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15358
Corresponding_CDS_historyCBG15358:bp194
Corresponding_transcriptCBG15358.1
Other_sequence (19)
Experimental_infoExpr_patternExpr1063546
Microarray_resultsGPL8303_CB6_WBGene00035657_A
GPL8303_CB6_WBGene00035657_B
GPL14143_CBG15358_310-369_0.831_46_C
GPL14143_CBG15358_508-567_0.863_27_B
GPL14143_CBG15358_640-699_0.879_18_A
MethodGene