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WormBase Tree Display for Gene: WBGene00036542

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Name Class

WBGene00036542SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-unc-86From_analysisInferred_from_orthology
Sequence_nameCBG16662
Molecular_nameCBG16662
CBG16662.1
CBP18728
Other_nameCBG_16662Accession_evidenceNDBHE600949
Public_nameCbr-unc-86
DB_infoDatabaseNDBlocus_tagCBG_16662
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-86
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000022.27412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.58336From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.09936From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.37661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.43556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.04641From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.18674From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000032.0485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.67166From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.29483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.14949From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.10515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000423.0535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
24.9779From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
26.9024From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
24.2145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
27.0419From_analysisRNASeq.briggsae.WBls:0000004.control_mean
27.0499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
33.9891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.565556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.767659From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.9243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.41917From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.59805From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.42149From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.42845From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.18698From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.619085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.54839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.90363From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.11175From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.25887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.02066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.169603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.315157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.378619From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.424196From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.442082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.769943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.603041From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.606013From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.780558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.1409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.121244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.198105From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.269749From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.37721From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.652185From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.287657From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.351837From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.76228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.0485From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.9135From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.15369From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.32626From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139941
00139942
00139943
Ortholog (29)
ParalogWBGene00033471Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034846Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-86. In C. elegans, unc-86 is involved in mechanosensory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16662
Corresponding_CDS_historyCBG16662:bp194
CBG16662:bp255
Corresponding_transcriptCBG16662.1
Other_sequenceAcan_isotig06105
Dviv_isotig17894
Oden_isotig25490
Oden_isotig25565
Dviv_isotig17893
Acan_isotig06104
Dviv_isotig21248
XIC02391_1
XI03029
JI170316.1
Experimental_infoExpr_patternExpr1069623
Microarray_resultsGPL8303_CB6_WBGene00036542_A
GPL8303_CB6_WBGene00036542_B
GPL14143_CBG16662_414-473_0.899_17_C
GPL14143_CBG16662_580-639_0.925_2_A
GPL14143_CBG16662_821-880_0.924_3_B
MethodGene