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WormBase Tree Display for Gene: WBGene00039055

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Name Class

WBGene00039055SMapS_parentSequencecb25.fpc4152
IdentityVersion2
NameCGC_nameCbr-unc-5From_analysisInferred_from_orthology
Sequence_nameCBG19929
Molecular_nameCBG19929a
CBG19929a.1
CBP35361
CBG19929b
CBP40740
CBG19929b.1
Other_nameCBG_19929Accession_evidenceNDBHE601481
Public_nameCbr-unc-5
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Allele (25)
RNASeq_FPKMWBls:000000210.0173From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
10.1332From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.7419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.64028From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
5.7191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
9.02964From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.32879From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000319.5595From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
23.1385From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
26.7176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.6804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
21.6525From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000451.3608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
52.0612From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
52.7616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
48.2264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
50.5932From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
51.1006From_analysisRNASeq.briggsae.WBls:0000004.control_mean
52.5612From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.00672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.89513From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.27366From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
11.3393From_analysisRNASeq.briggsae.WBls:0000027.control_median
12.9207From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.9975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003513.8116From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.1091From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.7854From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.8795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
14.4138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.45164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.69129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000413.83286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.8368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.13099From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.42518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.09895From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.30095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.31601From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.82519From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.20685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
8.34852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.05846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3.10182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.2522From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.74699From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.09311From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.22937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.397From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.54179From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.71279From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.7531From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.69129From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.7294From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
8.98248From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00142553
00142554
00142555
00142556
Ortholog (34)
Structured_descriptionAutomated_descriptionPredicted to enable netrin receptor activity. Predicted to be involved in netrin-activated signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans unc-5. In C. elegans, unc-5 is involved in several processes, including axon guidance; regulation of neuron projection development; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19929a
CBG19929b
Corresponding_CDS_historyCBG19929:bp194
Corresponding_transcriptCBG19929a.1
CBG19929b.1
Other_sequenceJI475712.1
DN557653.1
JO472060.1
JI459463.1
MIC01466_1
PTC03306_1
LSC00760_1
CJC11776_1
JI165198.1
Dviv_isotig23366
Experimental_infoExpr_patternExpr1056453
Microarray_resultsGPL8303_CB6_WBGene00039055_A
GPL8303_CB6_WBGene00039055_B
GPL8303_CB6_WBGene00039055_C
GPL8303_CB6_WBGene00039055_D
GPL8303_CB6_WBGene00039055_E
GPL14143_CBG19929_2090-2149_0.904_20_C
GPL14143_CBG19929_2420-2479_0.942_2_A
GPL14143_CBG19929_2731-2790_0.799_139_B
MethodGene