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WormBase Tree Display for Gene: WBGene00039233

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Name Class

WBGene00039233SMapS_parentSequencecb25.fpc4154
IdentityVersion6
NameCGC_nameCbr-unc-103From_analysisInferred_from_orthology
Sequence_nameCBG20190
Molecular_name (27)
Other_nameCBG_20190Accession_evidenceNDBHE601013
CBG_20185
CBG_20187
CBG_26024
Cbr-unc-103.2From_analysisInferred_from_orthology
Public_nameCbr-unc-103
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-103.2
320 Oct 2016 10:55:05WBPerson4025EventAcquires_mergeWBGene00039231
420 Oct 2016 10:55:05WBPerson4025EventAcquires_mergeWBGene00039232
520 Oct 2016 10:55:05WBPerson4025EventAcquires_mergeWBGene00087438
620 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-unc-103
Other_nameCbr-unc-103.2
Acquires_mergeWBGene00039231
WBGene00039232
WBGene00087438
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00049414
WBVar00049429
WBVar00049434
WBVar00139146
WBVar00049419
WBVar00139147
WBVar00049439
WBVar00139148
WBVar00049424
WBVar00139149
RNASeq_FPKMWBls:000000210.3027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.97449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.40507From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.56075From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.30806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.85656From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.74758From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.684807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.58624From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.48767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1.69705From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.91866From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.25564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.84913From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
6.44262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
6.1084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
6.13869From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.36519From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.52158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.1278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.51184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6.57208From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.73724From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.3499From_analysisRNASeq.briggsae.WBls:0000027.control_median
15.326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.63443From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.489From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.4563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.11808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.88412From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.58599From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.93659From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.28785From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411.29677From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.33455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.54817From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.7618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.35466From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.02552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.61474From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.95474From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.46768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
4.84211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.71489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.24457From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.2928From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.30114From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.45689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.74653From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.36094From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.37901From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.7016From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001014.88412From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.77475From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.86311From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.73756From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142707
00142708
00142709
00142710
00142711
00142712
Ortholog (30)
ParalogWBGene00028880Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029133Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032686Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00045213Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-103. In C. elegans, unc-103 is involved in mating behavior and regulation of muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20190a
CBG20190b
CBG20190c
CBG20190d
CBG20190e
CBG20190f
CBG20190g
CBG20190h
CBG20190i
Corresponding_CDS_historyCBG20190:bp194
CBG20190:bp256
Corresponding_transcriptCBG20190a.1
CBG20190b.1
CBG20190c.1
CBG20190d.1
CBG20190e.1
CBG20190f.1
CBG20190g.1
CBG20190h.1
CBG20190i.1
Other_sequence (101)
Experimental_infoExpr_patternExpr1063606
Expr1066110
Expr1069834
Microarray_resultsGPL8303_CB6_WBGene00039233_A
GPL8303_CB6_WBGene00039233_B
GPL14143_CBG20185_153-212_0.481_7_A
GPL14143_CBG20190_1725-1784_0.847_33_C
GPL14143_CBG20190_1945-2004_0.604_226_B
GPL14143_CBG20190_2370-2429_0.680_169_A
GPL14143_CBG26024_133-192_0.960_1_A
MethodGene