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WormBase Tree Display for Gene: WBGene00040440

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Name Class

WBGene00040440SMapS_parentSequencecb25.fpc4260b
IdentityVersion2
NameCGC_nameCbr-unc-129From_analysisInferred_from_orthology
Sequence_nameCBG21741
Molecular_nameCBG21741
CBG21741.1
CBP05164
Other_nameCBG_21741Accession_evidenceNDBHE600966
Public_nameCbr-unc-129
DB_infoDatabaseNDBlocus_tagCBG_21741
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-129
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000214.0795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.7953From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
19.1871From_analysisRNASeq.briggsae.WBls:0000002.control_mean
27.6865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
12.3367From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
14.9374From_analysisRNASeq.briggsae.WBls:0000002.control_median
17.4745From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000332.3397From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
36.677From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
41.0143From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
27.913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
33.7557From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000475.0277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
75.0294From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
75.031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
74.0844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
79.5558From_analysisRNASeq.briggsae.WBls:0000004.control_mean
86.5866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
87.0495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.7972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
19.827From_analysisRNASeq.briggsae.WBls:0000027.control_mean
49.4371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
8.24662From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
25.3573From_analysisRNASeq.briggsae.WBls:0000027.control_median
25.4872From_analysisRNASeq.briggsae.WBls:0000027.control_mean
42.468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003520.3994From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.8317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.7726From_analysisRNASeq.briggsae.WBls:0000038.control_mean
17.4011From_analysisRNASeq.briggsae.WBls:0000038.control_median
21.9705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
24.7831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.50524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000413.35328From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
4.14226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
4.23442From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.32658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.13721From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.72673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.1754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.8734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.52666From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.26627From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000631.90243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.97778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.08352From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.38607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
2.5351From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.32572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.2348From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.76262From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.9002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010114.0795From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.0996From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
14.9374From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.5073From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143851
00143852
Ortholog (27)
ParalogWBGene00030533Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039598Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042912Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans unc-129. In C. elegans, unc-129 is involved in several processes, including axon guidance; backward locomotion; and inductive cell migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21741
Corresponding_CDS_historyCBG21741:bp194
Corresponding_transcriptCBG21741.1
Other_sequenceJI475912.1
Hbac_isotig04808
CBC06946_1
Experimental_infoExpr_patternExpr1052790
Microarray_resultsGPL8303_CB6_WBGene00040440_A
GPL8303_CB6_WBGene00040440_B
GPL14143_CBG21741_270-329_0.739_100_B
GPL14143_CBG21741_587-646_0.854_45_C
GPL14143_CBG21741_1161-1220_0.955_1_A
MethodGene