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WormBase Tree Display for Gene: WBGene00042654

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Name Class

WBGene00042654SMapS_parentSequencecb25.NA_193
IdentityVersion2
NameCGC_nameCbr-unc-62From_analysisInferred_from_orthology
Sequence_nameCBG24578
Molecular_name (21)
Other_nameCBG_24578Accession_evidenceNDBHE601496
Public_nameCbr-unc-62
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-unc-62
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00140314
WBVar00140315
WBVar00140316
WBVar00140317
WBVar00140313
RNASeq_FPKMWBls:000000217.5656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
27.4895From_analysisRNASeq.briggsae.WBls:0000002.control_mean
30.1919From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
34.7111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
19.7023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
24.9471From_analysisRNASeq.briggsae.WBls:0000002.control_median
25.5427From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000378.7333From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
86.7701From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
94.8069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
77.1618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
83.5673From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004119.556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
125.741From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
131.926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
130.114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
130.338From_analysisRNASeq.briggsae.WBls:0000004.control_mean
132.236From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
137.858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002732.2687From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
39.84From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
42.8158From_analysisRNASeq.briggsae.WBls:0000027.control_mean
56.3387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
36.3027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
38.0714From_analysisRNASeq.briggsae.WBls:0000027.control_median
41.1875From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003534.6846From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003820.6666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
21.5855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
22.7235From_analysisRNASeq.briggsae.WBls:0000038.control_median
22.9812From_analysisRNASeq.briggsae.WBls:0000038.control_mean
23.8615From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
25.8112From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004115.2373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
17.0983From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.5715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
17.615From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.6585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
17.9258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
12.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
14.8374From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.4044From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.90616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006316.5291From_analysisRNASeq.briggsae.WBls:0000063.control_mean
18.9685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
19.7978From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.8822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
21.9972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.729From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.7286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
19.3832From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010125.8112From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.9956From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
28.0016From_analysisRNASeq.briggsae.total_over_all_stages.control_median
43.2791From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145676
00145677
Ortholog (30)
ParalogWBGene00027778Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032103Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036414Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-62. In C. elegans, unc-62 is involved in cell fate specification; muscle cell differentiation; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24578a
CBG24578b
CBG24578c
CBG24578d
CBG24578e
CBG24578f
CBG24578g
Corresponding_CDS_historyCBG24578:bp194
CBG24578:bp206
CBG24578:bp255
Corresponding_transcriptCBG24578a.1
CBG24578b.1
CBG24578c.1
CBG24578d.1
CBG24578e.1
CBG24578f.1
CBG24578g.1
Other_sequence (63)
Experimental_infoExpr_patternExpr1051876
Microarray_resultsGPL8303_CB6_WBGene00042654_A
GPL8303_CB6_WBGene00042654_B
GPL14143_CBG24578_530-589_0.795_24_C
GPL14143_CBG24578_2019-2078_0.834_13_B
GPL14143_CBG24578_2266-2325_0.543_182_A
ReferenceWBPaper00030889
MethodGene