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WormBase Tree Display for Gene: WBGene00053536

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Name Class

WBGene00053536SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-unc-130From_analysisInferred_from_orthology
Sequence_nameCRE02153
Molecular_nameCRE02153
CRE02153.1
RP35743
Other_namecr01.sctg2.wum.320
Public_nameCre-unc-130
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-unc-130
303 Jul 2008 11:44:43WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE02153
Other_namecr01.sctg2.wum.320
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000044.6511From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
5.31406From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
5.97703From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.0529From_analysisRNASeq.remanei.WBls:0000027.control_mean
11.3564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
11.8115From_analysisRNASeq.remanei.WBls:0000027.control_median
12.2665From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1.30515From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
15.2837From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.7619From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.94964From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.33606From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000410.598517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.762443From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.857828From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.34286From_analysisRNASeq.remanei.WBls:0000041.control_median
1.55876From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.8279From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.35684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.94903From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001011.94704From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.48607From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00148753
00148754
00148755
Ortholog (32)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-130. In C. elegans, unc-130 is involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSCRE02153
Corresponding_transcriptCRE02153.1
Other_sequenceDviv_isotig17565
CR11553
Dviv_isotig17564
CBC08749_1
CRC07576_1
CR11552
JI182349.1
Experimental_infoExpr_patternExpr1097636
Microarray_resultsGPL14146_CRE02153_370-429_0.932_7_C
GPL14146_CRE02153_445-504_0.914_20_B
GPL14146_CRE02153_878-937_0.958_1_A
MethodGene