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WormBase Tree Display for Gene: WBGene00054935

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Name Class

WBGene00054935SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-unc-47From_analysisInferred_from_orthology
Sequence_nameCRE25209
Molecular_nameCRE25209
CRE25209.1
RP04189
Other_namecr01.sctg4.wum.288
Public_nameCre-unc-47
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-unc-47
303 Jul 2008 11:44:53WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25209
Other_namecr01.sctg4.wum.288
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.395474From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.435426From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.475378From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.358951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.7412From_analysisRNASeq.remanei.WBls:0000027.control_mean
3.28094From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.34595From_analysisRNASeq.remanei.WBls:0000027.control_median
3.41096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.91396From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.242311From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
1.6944From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.87298From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
2.9679From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000410.256635From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.338197From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.420369From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.603849From_analysisRNASeq.remanei.WBls:0000041.control_median
0.704205From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.787329From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.07909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1.34361From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (11)
WBls:00001010.651625From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.17009From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (31)
Paralog (18)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans unc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25209
Corresponding_transcriptCRE25209.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1092677
Microarray_resultsGPL14146_CRE25209_1112-1171_0.931_1_C
GPL14146_CRE25209_1146-1205_0.875_32_B
GPL14146_CRE25209_1378-1437_0.867_39_A
ReferenceWBPaper00038509
MethodGene