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WormBase Tree Display for Gene: WBGene00056204

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Name Class

WBGene00056204SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-unc-87From_analysisInferred_from_orthology
Sequence_nameCRE28495
Molecular_nameCRE28495
CRE28495.1
RP05981
Other_namecr01.sctg6.wum.280
Public_nameCre-unc-87
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:42WBPerson2970Name_changeCGC_nameCre-unc-87
303 Jul 2008 11:45:02WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28495
Other_namecr01.sctg6.wum.280
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000043.08392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
3.5396From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
3.99528From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:0000027212.906From_analysisRNASeq.remanei.WBls:0000027.control_mean
231.685From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
244.599From_analysisRNASeq.remanei.WBls:0000027.control_median
257.513From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
275.905From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
86.5213From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038194.776From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
507.365From_analysisRNASeq.remanei.WBls:0000038.control_mean
655.077From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
672.241From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041217.259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
272.693From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
273.656From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
392.242From_analysisRNASeq.remanei.WBls:0000041.control_median
409.392From_analysisRNASeq.remanei.WBls:0000041.control_mean
510.828From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
585.985From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
595.928From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:0000101380.041From_analysisRNASeq.remanei.total_over_all_stages.control_median
423.914From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00051281Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00052222Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00056029Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056433Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060094Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062365Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064707Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin repeat and Calponin family repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28495
Corresponding_transcriptCRE28495.1
Other_sequence (433)
Experimental_infoExpr_patternExpr1108517
Microarray_resultsGPL14146_CRE28495_1524-1583_0.953_1_A
Expression_clusterWBPaper00054996:activated_sperm_CRE
MethodGene