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WormBase Tree Display for Gene: WBGene00063566

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Name Class

WBGene00063566SMapS_parentSequenceCrem_Contig33
IdentityVersion3
NameCGC_nameCre-unc-80From_analysisInferred_from_orthology
Sequence_nameCRE21136
Molecular_nameCRE21136
CRE21136.1
RP27147
Other_namecr01.sctg40.wum.54
Public_nameCre-unc-80
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:52WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE21136
Other_namecr01.sctg40.wum.54
304 Jul 2008 11:06:44WBPerson4055Name_changeCGC_nameCre-unc-80
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.123696From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0.223191From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.322686From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000271.13563From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.91968From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.62626From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.76901From_analysisRNASeq.remanei.WBls:0000027.control_median
5.91177From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.00505From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.782578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
1.60954From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.99487From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.05118From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.181193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.246766From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.314032From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.406965From_analysisRNASeq.remanei.WBls:0000041.control_median
0.499899From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.505708From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.890485From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.901873From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001010.725473From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.42323From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (33)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Armadillo-type fold; Cation channel complex component UNC80, N-terminal; and UNC80 N-terminal. Is an ortholog of C. elegans unc-80. In C. elegans, unc-80 is involved in several processes, including monoatomic cation homeostasis; positive regulation of locomotion; and response to anesthetic.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE21136
Corresponding_transcriptCRE21136.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1117479
Microarray_resultsGPL14146_CRE21136_9422-9481_0.922_6_C
GPL14146_CRE21136_9458-9517_0.938_1_A
GPL14146_CRE21136_9608-9667_0.851_55_B
MethodGene