WormBase Tree Display for Gene: WBGene00096231
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| WBGene00096231 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-unc-87 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA06677 | ||||||||
| Molecular_name | PPA06677 | ||||||||
| PPA06677.1 | |||||||||
| PP57962 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000063039 | ||||||||
| UMM-S397-1.35 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-unc-87 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:43 | WBPerson4055 | Name_change | CGC_name | Ppa-unc-87 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00203989 | ||||
| 4 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00204066 | ||||
| 5 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00205633 | ||||
| 6 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-87 | ||||
| 8 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-87 | ||||
| Acquires_merge | WBGene00204066 | ||||||||
| WBGene00203989 | |||||||||
| WBGene00205633 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| RNASeq_FPKM | WBls:0000032 | 22.8813 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 13.8197 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 18.5777 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00101020 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00108049 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00273421 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00305012 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06677 | |||||||
| Corresponding_transcript | PPA06677.1 | ||||||||
| Other_sequence (523) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_32833 | |||||||
| GPL14372_Probes_89901 | |||||||||
| GPL14372_Probes_89902 | |||||||||
| GPL14372_Probes_89903 | |||||||||
| GPL14372_Probes_89904 | |||||||||
| GPL14372_Probes_89905 | |||||||||
| GPL14372_Probes_89909 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Remark | [190208 pad] The CGC name Ppa-unc-87 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-unc-87 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
