WormBase Tree Display for Gene: WBGene00104188
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| WBGene00104188 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-sqv-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA14634 | ||||||||
| Molecular_name | PPA14634 | ||||||||
| PPA14634.1 | |||||||||
| PP64002 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000071115 | ||||||||
| GENEPREDICTION_SNAP300000071116 | |||||||||
| GENEPREDICTION_SNAP300000071117 | |||||||||
| UMM-S632-0.4 | Person_evidence | WBPerson606 | |||||||
| Ppa-unc-122 | Inferred_automatically | from gene merge | |||||||
| Public_name | Ppa-sqv-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-unc-122 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00104189 | ||||
| 4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00104190 | ||||
| 5 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-sqv-4 | ||||
| Other_name | Ppa-unc-122 | ||||||||
| Acquires_merge | WBGene00104189 | ||||||||
| WBGene00104190 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sqv | ||||||||
| RNASeq_FPKM | WBls:0000032 | 17.1051 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.6269 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 17.1051 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 17.7757 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00179804 | ||||||||
| 00179805 | |||||||||
| 00179806 | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to enable NAD binding activity and UDP-glucose 6-dehydrogenase activity. Is an ortholog of C. elegans sqv-4. In C. elegans, sqv-4 is involved in several processes, including egg-laying behavior; glycosaminoglycan biosynthetic process; and vulval development. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA14634 | |||||||
| Corresponding_transcript | PPA14634.1 | ||||||||
| Other_sequence (55) | |||||||||
| Experimental_info | Microarray_results (21) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Method | Gene |
