WormBase Tree Display for Gene: WBGene00105848
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| WBGene00105848 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-unc-119 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA16294 | ||||||||
| Molecular_name | PPA16294 | ||||||||
| PPA16294.1 | |||||||||
| PP64665 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000072742 | ||||||||
| GENEPREDICTION_SNAP300000072743 | |||||||||
| UMM-S66-8.39 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-unc-119 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00105849 | ||||
| Acquires_merge | WBGene00105849 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| Allele | WBVar02147239 | ||||||||
| RNASeq_FPKM | WBls:0000032 | 7.52352 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.3929 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 26.6553 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 7.52352 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Immunoglobulin E-set; Protein unc-119 homologue A-like; Zinc finger, RING/FYVE/PHD-type; GMP phosphodiesterase, delta subunit; GMP-PDE, delta subunit; GMP phosphodiesterase, delta subunit superfamily; Bromodomain-like superfamily; Zinc finger, PHD-finger; Zinc finger, PHD-type; Zinc finger, FYVE/PHD-type; and PHD-finger. Is an ortholog of C. elegans unc-119. In C. elegans, unc-119 is involved in several processes, including body morphogenesis; dauer larval development; and regulation of multicellular organismal process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA16294 | |||||||
| Corresponding_transcript | PPA16294.1 | ||||||||
| Other_sequence | JI474239.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_67307 | |||||||
| GPL14372_Probes_67309 | |||||||||
| GPL14372_Probes_67310 | |||||||||
| GPL14372_Probes_67314 | |||||||||
| GPL14372_Probes_67315 | |||||||||
| GPL14372_Probes_67316 | |||||||||
| GPL14372_Probes_67317 | |||||||||
| GPL14372_Probes_67318 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Method | Gene |
