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WormBase Tree Display for Gene: WBGene00117349

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Name Class

WBGene00117349SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameCGC_namePpa-unc-18From_analysisInferred_from_orthology
Sequence_namePPA27795
Molecular_namePPA27795
PPA27795.1
PP69402
Other_nameGENEPREDICTION_SNAP300000084620
UMM-S13-21.60Person_evidenceWBPerson606
Public_namePpa-unc-18
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000322.07244From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.50668From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.07244From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.44759From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00185813
Ortholog (23)
ParalogWBGene00099848Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115057Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273338Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276554Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans unc-18. In C. elegans, unc-18 is involved in chemical synaptic transmission and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA27795
Corresponding_transcriptPPA27795.1
Other_sequence (39)
Experimental_infoMicroarray_resultsGPL14372_Probes_56961
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene