WormBase Tree Display for Variation: WBVar00143025

WBVar00143025 Name: Public_name: e191
    Other_name: CE36087:p.Gln16Ter
      CE05183:p.Gln16Ter
      B0564.10a.1:c.46C>T
      B0564.10b.1:c.46C>T
    HGVSg: CHROMOSOME_IV:g.13119259C>T
  Sequence_details: SMap: S_parent: Sequence: B0564
    Flanking_sequences: gccacactgactgctatacaccagcagcag agtcgcataatcggtttgttttattttttg
    Mapping_target: B0564
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006766
    Transcript: B0564.10b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: B0564.10b.1:c.46C>T
        HGVSp: CE36087:p.Gln16Ter
        cDNA_position: 170
        CDS_position: 46
        Protein_position: 16
        Exon_number: 2/10
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
      B0564.10a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: B0564.10a.1:c.46C>T
        HGVSp: CE05183:p.Gln16Ter
        cDNA_position: 283
        CDS_position: 46
        Protein_position: 16
        Exon_number: 2/10
        Codon_change: Cag/Tag
        Amino_acid_change: Q/*
    Interactor: WBInteraction000502940
      WBInteraction000503400
      WBInteraction000525407
      WBInteraction000541742
      WBInteraction000558281
      WBInteraction000576769
  Genetics: Interpolated_map_position: IV 8.20747
    Mapping_data: In_2_point: 97
        121
        317
        555
        729
        730
        823
        4659
      In_multi_point (45)
      In_pos_neg_data (11)
  Description: Phenotype (28)
    Phenotype_not_observed: WBPhenotype:0000631 Paper_evidence: WBPaper00035198
        Curator_confirmed: WBPerson712
        Remark: Animals do not exhibit anterior convulsions when treated with pentylenetetrazole(PTZ). Paper_evidence: WBPaper00035198
            Curator_confirmed: WBPerson712
        Variation_effect: Null: Paper_evidence: WBPaper00035198
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00004251 Paper_evidence: WBPaper00035198
              Curator_confirmed: WBPerson712
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001645 Paper_evidence: WBPaper00040284
        Curator_confirmed: WBPerson2987
        Remark: Table S2 Paper_evidence: WBPaper00040284
            Curator_confirmed: WBPerson2987
      WBPhenotype:0001652 Paper_evidence: WBPaper00032446
        Curator_confirmed: WBPerson2021
  Reference (17)
  Method: Substitution_allele