WormBase Tree Display for CDS: C15C7.2
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| C15C7.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C15C7 | |||
| Structure | Source_exons (11) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q18013 | ||
| UniProt | UniProtAcc | Q18013 | ||||
| UniProt_GCRP | UniProtAcc | Q18013 | ||||
| AlphaFold | entry | Q18013 | ||||
| NCBI_protein | GI_number | GI:373218960 | ||||
| TREEFAM | TREEFAM_ID | TF318590 | ||||
| Protein_id | CHROMOSOME_X | CCD64587 | 1 | |||
| DB_remark | GCC-1 protein; contains similarity to Pfam domain PF01465 (GRIP domain); contains similarity to Interpro domain IPR000237 (GRIP domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00002220 | ||||
| Corresponding_transcript | C15C7.2.1 | |||||
| Corresponding_protein | CE38486 | |||||
| Corresponding_PCR_product | cenix:103-f4 | |||||
| mv_C15C7.2 | ||||||
| sjj_C15C7.2 | ||||||
| smd_C15C7.2 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_13349 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_103861 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_95959 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_11855 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_88292 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_99277 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_93579 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_11336 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_12689 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_12838 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_56929 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_14284 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_11231 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_8640 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_21762 | ||||||
| EM_Nanopore_Li_189070 | Inferred_automatically | transcript_builder.pl | ||||
| EC004512 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_210951 | Inferred_automatically | transcript_builder.pl | ||||
| FM865073 | Inferred_automatically | transcript_builder.pl | ||||
| CK576533 | Inferred_automatically | transcript_builder.pl | ||||
| RST5_372520 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_337342 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_304802 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_186099 | Inferred_automatically | transcript_builder.pl | ||||
| RST3_377215 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_167795 | Inferred_automatically | transcript_builder.pl | ||||
| yk121h6.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk1449a04.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_206422 | Inferred_automatically | transcript_builder.pl | ||||
| FN901123 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_213714 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_12049 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_186217 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4474|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_206267 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00040595 | |||||
| WBRNAi00010783 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | GRIP domain-containing protein | Accession_evidence | UniProt | TR:Q18013 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 08 Apr 2005 00:00:00 | WBPerson1849 | ||||
| Remark | [20050408 tb] removed 5' exon based on sl1 trans-splice acceptor. | Curator_confirmed | WBPerson1849 | |||
| Associated_feature | WBsf015729 | |||||
| Method | curated |
