WormBase Tree Display for CDS: Bm4710
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Bm4710 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||
Structure | Source_exons | 1 | 127 | |||
572 | 661 | |||||
805 | 947 | |||||
1203 | 1330 | |||||
1401 | 1626 | |||||
1728 | 1870 | |||||
1952 | 2048 | |||||
2256 | 2404 | |||||
2761 | 2842 | |||||
2915 | 3061 | |||||
3209 | 3365 | |||||
3481 | 3654 | |||||
3877 | 3970 | |||||
4174 | 4343 | |||||
4550 | 4713 | |||||
5055 | 5213 | |||||
5328 | 5491 | |||||
5597 | 5713 | |||||
5934 | 6059 | |||||
6187 | 6416 | |||||
6559 | 6872 | |||||
DB_info | Database | KEGG | KEGG_id | 3.1.3.36 | ||
TrEMBL | UniProtAcc | A0A0H5S119 | ||||
UniProt | UniProtAcc | A0A0H5S119 | ||||
AlphaFold | entry | A0A0H5S119 | ||||
UniProt_GCRP | UniProtAcc | A0A0H5S119 | ||||
Protein_id | Bm_v4_ChrX_scaffold_001 | CRZ22188 | 1 | |||
DB_remark | BMA-UNC-26 protein; contains similarity to Pfam domains PF02383 (SacI homology domain), PF03372 (Endonuclease/Exonuclease/phosphatase family), PF08952 (Domain of unknown function (DUF1866)); contains similarity to Interpro domains IPR002013 (SAC domain), IPR000300 (Inositol polyphosphate-related phosphatase), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily), IPR015047 (Synaptojanin-1/2, RNA recognition motif) | |||||
Origin | From_laboratory | HX | ||||
Species | Brugia malayi | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | RATT | |||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00224971 | ||||
Corresponding_transcript | Bm4710.1 | |||||
Corresponding_protein | BM29383 | |||||
Matching_cDNA | brugia_GG6281|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
Brief_identification | Endonuclease/Exonuclease/phosphatase family protein | Accession_evidence | TIGR | Bm1_02165 | ||
RNASeq_FPKM (10) | ||||||
Method | curated |