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WormBase Tree Display for CDS: OVOC3747

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Name Class

OVOC3747EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_209
StructureSource_exons179
14121569
42074322
1532415398
2870928814
3130231481
3581535954
3630536423
3702537211
3731637490
3814638249
3918839363
3976239872
4019540252
4070140828
4136041582
4229442425
4318343255
4387743997
4417044300
4459044671
4494745073
4544545634
4605046156
4637346478
4717147359
4857048752
4931849452
5002650190
5071850828
5146251662
5185651921
5244852539
5297853143
5370353830
5432354525
5494755054
5559055678
5693757052
5800058093
5876558827
6021260311
6055360640
6079660986
6136561631
6217162397
DB_infoDB_remarkOVO-UNC-2 protein; contains similarity to Pfam domains PF00520 (Ion transport protein), PF08763 (Voltage gated calcium channel IQ domain), PF16905 (Voltage-dependent L-type calcium channel, IQ-associated); contains similarity to Interpro domains IPR014873 (Voltage-dependent calcium channel, alpha-1 subunit, IQ domain), IPR031649 (Voltage-dependent L-type calcium channel, IQ-associated domain), IPR005821 (Ion transport domain), IPR027359 (Voltage-dependent channel domain superfamily), IPR002077 (Voltage-dependent calcium channel, alpha-1 subunit)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCoding (2)
VisibleGeneWBGene00240556
Corresponding_transcriptOVOC3747.1
Corresponding_proteinOVP14484
Brief_identificationVoltage-dependent L-type calcium channel subunit alpha-1F homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001072.13073From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.688589From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
11.0366From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
13.4785From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006642.06399From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.44539From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140422 es9] Merged OVOC3746, OVOC3747, OVOC3748 and OVOC3749 based on RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated