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WormBase Tree Display for CDS: OVOC8391

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Name Class

OVOC8391SMapS_parentSequenceOVOC_OM3_75
StructureSource_exons1121
24732629
28423068
33933512
37793883
41164239
45494706
50725239
54015529
59986121
64286567
67576860
70357227
73557503
77427862
80918224
84458640
89349106
94009556
97419841
1010110410
1057210687
1081211043
1123211486
1168311817
1214012313
1244112547
1284412993
1311113177
1347013594
1395714074
1434514506
1463314842
1510415275
1584916009
1625016419
1692017052
1732717430
1760817800
1806618154
1832318448
1863318702
1887319027
1934025989
2616527466
2785128026
2850830818
3109931291
3143731627
3195732158
3247632586
3272932871
3315733354
3356733869
3409834242
3443134504
3478934911
3502435146
3533935481
3588335980
3624636456
3682937056
3739237645
3844838540
DB_infoDB_remarkOVO-DIG-1 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF00047 (Immunoglobulin domain), PF00092 (von Willebrand factor type A domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR003599 (Immunoglobulin subtype), IPR001881 (EGF-like calcium-binding domain), IPR002035 (von Willebrand factor, type A), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR000742 (EGF-like domain), IPR013783 (Immunoglobulin-like fold), IPR011041 (Soluble quinoprotein glucose/sorbosone dehydrogenase), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily), IPR013151 (Immunoglobulin)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00245200
Corresponding_transcriptOVOC8391.1
Corresponding_proteinOVP11296
Brief_identificationMesocentin homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001076.91117From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.98578From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
29.8706From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
35.676From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006643.45889From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
9.79025From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated